Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01424 (long intergenic non-protein coding RNA 1424)

Identity

Other alias-
HGNC (Hugo) LINC01424
LocusID (NCBI) 101928689
Atlas_Id 65984
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 46222156 and ends at 46224631 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01424   40558
Cards
Entrez_Gene (NCBI)LINC01424  101928689  long intergenic non-protein coding RNA 1424
Aliases
GeneCards (Weizmann)LINC01424
Ensembl hg19 (Hinxton) [Gene_View]  chr21:46222156-46224631 [Contig_View]  LINC01424 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:46222156-46224631 [Contig_View]  LINC01424 [Vega]
TCGA cBioPortalLINC01424
AceView (NCBI)LINC01424
Genatlas (Paris)LINC01424
WikiGenes101928689
SOURCE (Princeton)LINC01424
Genetics Home Reference (NIH)LINC01424
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01424  -     chr21:46222156-46224631 +  21q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01424  -     21q22.3   [Description]    (hg38-Dec_2013)
EnsemblLINC01424 - 21q22.3 [CytoView hg19]  LINC01424 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC01424 [Mapview hg19]  LINC01424 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX100043 HG511900 HY006996 N50783
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_011512 NW_004929427
Consensus coding sequences : CCDS (NCBI)LINC01424
Cluster EST : UnigeneHs.116142 [ NCBI ]
CGAP (NCI)Hs.116142
Gene ExpressionLINC01424 [ NCBI-GEO ]   LINC01424 [ EBI - ARRAY_EXPRESS ]   LINC01424 [ SEEK ]   LINC01424 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01424 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928689
GTEX Portal (Tissue expression)LINC01424
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01424
DMDM Disease mutations101928689
Blocks (Seattle)LINC01424
Protein Interaction databases
BioGRIDLINC01424
STRING (EMBL)LINC01424
ZODIACLINC01424
Ontologies - Pathways
Huge Navigator LINC01424 [HugePedia]
snp3D : Map Gene to Disease101928689
BioCentury BCIQLINC01424
ClinGenLINC01424
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928689
Clinical trialLINC01424
Miscellaneous
canSAR (ICR)LINC01424 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01424
EVEXLINC01424
GoPubMedLINC01424
iHOPLINC01424
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:53 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.