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LINC01425 (long intergenic non-protein coding RNA 1425)

Identity

Other alias-
HGNC (Hugo) LINC01425
LocusID (NCBI) 101927821
Atlas_Id 65985
Location 21q21.1  [Link to chromosome band 21q21]
Location_base_pair Starts at 23119305 and ends at 23169735 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01425   50733
Cards
Entrez_Gene (NCBI)LINC01425  101927821  long intergenic non-protein coding RNA 1425
Aliases
GeneCards (Weizmann)LINC01425
Ensembl hg19 (Hinxton)ENSG00000233997 [Gene_View]  chr21:23119305-23169735 [Contig_View]  LINC01425 [Vega]
Ensembl hg38 (Hinxton)ENSG00000233997 [Gene_View]  chr21:23119305-23169735 [Contig_View]  LINC01425 [Vega]
ICGC DataPortalENSG00000233997
TCGA cBioPortalLINC01425
AceView (NCBI)LINC01425
Genatlas (Paris)LINC01425
WikiGenes101927821
SOURCE (Princeton)LINC01425
Genetics Home Reference (NIH)LINC01425
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01425  -     chr21:23119305-23169735 +  21q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01425  -     21q21.1   [Description]    (hg38-Dec_2013)
EnsemblLINC01425 - 21q21.1 [CytoView hg19]  LINC01425 - 21q21.1 [CytoView hg38]
Mapping of homologs : NCBILINC01425 [Mapview hg19]  LINC01425 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035642 HG511634 HG511635
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_011512 NW_004929426
Consensus coding sequences : CCDS (NCBI)LINC01425
Cluster EST : UnigeneHs.334181 [ NCBI ]
CGAP (NCI)Hs.334181
Alternative Splicing GalleryENSG00000233997
Gene ExpressionLINC01425 [ NCBI-GEO ]   LINC01425 [ EBI - ARRAY_EXPRESS ]   LINC01425 [ SEEK ]   LINC01425 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01425 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927821
GTEX Portal (Tissue expression)LINC01425
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01425
DMDM Disease mutations101927821
Blocks (Seattle)LINC01425
Human Protein AtlasENSG00000233997
Protein Interaction databases
FunCoupENSG00000233997
BioGRIDLINC01425
STRING (EMBL)LINC01425
ZODIACLINC01425
Ontologies - Pathways
Huge Navigator LINC01425 [HugePedia]
snp3D : Map Gene to Disease101927821
BioCentury BCIQLINC01425
ClinGenLINC01425
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927821
Clinical trialLINC01425
Miscellaneous
canSAR (ICR)LINC01425 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01425
EVEXLINC01425
GoPubMedLINC01425
iHOPLINC01425
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:54 CET 2017

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