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LINC01428 (long intergenic non-protein coding RNA 1428)

Identity

Other alias-
HGNC (Hugo) LINC01428
LocusID (NCBI) 101929265
Atlas_Id 65988
Location 20p12.3  [Link to chromosome band 20p12]
Location_base_pair Starts at 7127114 and ends at 7234849 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01428   50738
Cards
Entrez_Gene (NCBI)LINC01428  101929265  long intergenic non-protein coding RNA 1428
Aliases
GeneCards (Weizmann)LINC01428
Ensembl hg19 (Hinxton)ENSG00000228888 [Gene_View]  chr20:7127114-7234849 [Contig_View]  LINC01428 [Vega]
Ensembl hg38 (Hinxton)ENSG00000228888 [Gene_View]  chr20:7127114-7234849 [Contig_View]  LINC01428 [Vega]
ICGC DataPortalENSG00000228888
TCGA cBioPortalLINC01428
AceView (NCBI)LINC01428
Genatlas (Paris)LINC01428
WikiGenes101929265
SOURCE (Princeton)LINC01428
Genetics Home Reference (NIH)LINC01428
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01428  -     chr20:7127114-7234849 -  20p12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01428  -     20p12.3   [Description]    (hg38-Dec_2013)
EnsemblLINC01428 - 20p12.3 [CytoView hg19]  LINC01428 - 20p12.3 [CytoView hg38]
Mapping of homologs : NCBILINC01428 [Mapview hg19]  LINC01428 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038533 HG511161 HG511162
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)LINC01428
Cluster EST : UnigeneHs.637730 [ NCBI ]
CGAP (NCI)Hs.637730
Alternative Splicing GalleryENSG00000228888
Gene ExpressionLINC01428 [ NCBI-GEO ]   LINC01428 [ EBI - ARRAY_EXPRESS ]   LINC01428 [ SEEK ]   LINC01428 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01428 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929265
GTEX Portal (Tissue expression)LINC01428
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01428
DMDM Disease mutations101929265
Blocks (Seattle)LINC01428
Human Protein AtlasENSG00000228888
Protein Interaction databases
FunCoupENSG00000228888
BioGRIDLINC01428
STRING (EMBL)LINC01428
ZODIACLINC01428
Ontologies - Pathways
Huge Navigator LINC01428 [HugePedia]
snp3D : Map Gene to Disease101929265
BioCentury BCIQLINC01428
ClinGenLINC01428
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929265
Clinical trialLINC01428
Miscellaneous
canSAR (ICR)LINC01428 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01428
EVEXLINC01428
GoPubMedLINC01428
iHOPLINC01428
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:54 CET 2017

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