Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01431 (long intergenic non-protein coding RNA 1431)

Identity

Other alias-
HGNC (Hugo) LINC01431
LocusID (NCBI) 100505683
Atlas_Id 65991
Location 20p11.21  [Link to chromosome band 20p11]
Location_base_pair Starts at 23337231 and ends at 23338764 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01431   50744
Cards
Entrez_Gene (NCBI)LINC01431  100505683  long intergenic non-protein coding RNA 1431
Aliases
GeneCards (Weizmann)LINC01431
Ensembl hg19 (Hinxton)ENSG00000232645 [Gene_View]  chr20:23337231-23338764 [Contig_View]  LINC01431 [Vega]
Ensembl hg38 (Hinxton)ENSG00000232645 [Gene_View]  chr20:23337231-23338764 [Contig_View]  LINC01431 [Vega]
ICGC DataPortalENSG00000232645
TCGA cBioPortalLINC01431
AceView (NCBI)LINC01431
Genatlas (Paris)LINC01431
WikiGenes100505683
SOURCE (Princeton)LINC01431
Genetics Home Reference (NIH)LINC01431
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01431  -     chr20:23337231-23338764 -  20p11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01431  -     20p11.21   [Description]    (hg38-Dec_2013)
EnsemblLINC01431 - 20p11.21 [CytoView hg19]  LINC01431 - 20p11.21 [CytoView hg38]
Mapping of homologs : NCBILINC01431 [Mapview hg19]  LINC01431 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI693606 HG511265 HG511266 HG511267
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)LINC01431
Cluster EST : UnigeneHs.140295 [ NCBI ]
CGAP (NCI)Hs.140295
Alternative Splicing GalleryENSG00000232645
Gene ExpressionLINC01431 [ NCBI-GEO ]   LINC01431 [ EBI - ARRAY_EXPRESS ]   LINC01431 [ SEEK ]   LINC01431 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01431 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505683
GTEX Portal (Tissue expression)LINC01431
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01431
DMDM Disease mutations100505683
Blocks (Seattle)LINC01431
Human Protein AtlasENSG00000232645
Protein Interaction databases
FunCoupENSG00000232645
BioGRIDLINC01431
STRING (EMBL)LINC01431
ZODIACLINC01431
Ontologies - Pathways
Huge Navigator LINC01431 [HugePedia]
snp3D : Map Gene to Disease100505683
BioCentury BCIQLINC01431
ClinGenLINC01431
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505683
Clinical trialLINC01431
Miscellaneous
canSAR (ICR)LINC01431 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01431
EVEXLINC01431
GoPubMedLINC01431
iHOPLINC01431
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:55 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.