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LINC01433 (long intergenic non-protein coding RNA 1433)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01433
HGNC Alias symbLOC728228
LocusID (NCBI) 728228
Atlas_Id 57974
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 4193090 and ends at 4195953 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01433   50746
Cards
Entrez_Gene (NCBI)LINC01433  728228  long intergenic non-protein coding RNA 1433
Aliases
GeneCards (Weizmann)LINC01433
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr20:4193090-4195953 [Contig_View]  LINC01433 [Vega]
TCGA cBioPortalLINC01433
AceView (NCBI)LINC01433
Genatlas (Paris)LINC01433
WikiGenes728228
SOURCE (Princeton)LINC01433
Genetics Home Reference (NIH)LINC01433
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01433  -     chr20:4193090-4195953 +  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01433  -     20p13   [Description]    (hg19-Feb_2009)
GoldenPathLINC01433 - 20p13 [CytoView hg19]  LINC01433 - 20p13 [CytoView hg38]
genome Data Viewer NCBILINC01433 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AW651752 BC069037
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01433
Gene ExpressionLINC01433 [ NCBI-GEO ]   LINC01433 [ EBI - ARRAY_EXPRESS ]   LINC01433 [ SEEK ]   LINC01433 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01433 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01433 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728228
GTEX Portal (Tissue expression)LINC01433
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01433
DMDM Disease mutations728228
Blocks (Seattle)LINC01433
Protein Interaction databases
BioGRIDLINC01433
STRING (EMBL)LINC01433
ZODIACLINC01433
Ontologies - Pathways
Huge Navigator LINC01433 [HugePedia]
snp3D : Map Gene to Disease728228
BioCentury BCIQLINC01433
ClinGenLINC01433
Clinical trials, drugs, therapy
Protein Interactions : CTD728228
Clinical trialLINC01433
Miscellaneous
canSAR (ICR)LINC01433 (select the gene name)
HarmonizomeLINC01433
DataMed IndexLINC01433
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01433
EVEXLINC01433
GoPubMedLINC01433
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 15:20:31 CEST 2020

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