Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01435 (long intergenic non-protein coding RNA 1435)


Alias (NCBI)TCONS_00018040
HGNC (Hugo) LINC01435
HGNC Alias symbRP11-215N21.1
LocusID (NCBI) 103695365
Atlas_Id 65994
Location 10q25.1  [Link to chromosome band 10q25]
Location_base_pair Starts at 107871576 and ends at 108069293 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01435   50753
Entrez_Gene (NCBI)LINC01435    long intergenic non-protein coding RNA 1435
GeneCards (Weizmann)LINC01435
Ensembl hg19 (Hinxton)ENSG00000229981 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229981 [Gene_View]  ENSG00000229981 [Sequence]  chr10:107871576-108069293 [Contig_View]  LINC01435 [Vega]
ICGC DataPortalENSG00000229981
TCGA cBioPortalLINC01435
AceView (NCBI)LINC01435
Genatlas (Paris)LINC01435
SOURCE (Princeton)LINC01435
Genetics Home Reference (NIH)LINC01435
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01435  -     chr10:107871576-108069293 -  10q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01435  -     10q25.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01435 - 10q25.1 [CytoView hg19]  LINC01435 - 10q25.1 [CytoView hg38]
Genome Data Viewer NCBILINC01435 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA406208 BX116650
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01435
Gene ExpressionLINC01435 [ NCBI-GEO ]   LINC01435 [ EBI - ARRAY_EXPRESS ]   LINC01435 [ SEEK ]   LINC01435 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01435 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01435 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)103695365
GTEX Portal (Tissue expression)LINC01435
Human Protein AtlasENSG00000229981-LINC01435 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01435
Human Protein Atlas [tissue]ENSG00000229981-LINC01435 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:57:51 CEST 2021

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