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LINC01448 (long intergenic non-protein coding RNA 1448)

Identity

Other alias-
HGNC (Hugo) LINC01448
LocusID (NCBI) 101928795
Atlas_Id 66003
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 42661726 and ends at 42706447 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01448   50790
Cards
Entrez_Gene (NCBI)LINC01448  101928795  long intergenic non-protein coding RNA 1448
Aliases
GeneCards (Weizmann)LINC01448
Ensembl hg19 (Hinxton)ENSG00000238284 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238284 [Gene_View]  chr7:42661726-42706447 [Contig_View]  LINC01448 [Vega]
ICGC DataPortalENSG00000238284
TCGA cBioPortalLINC01448
AceView (NCBI)LINC01448
Genatlas (Paris)LINC01448
WikiGenes101928795
SOURCE (Princeton)LINC01448
Genetics Home Reference (NIH)LINC01448
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01448  -     chr7:42661726-42706447 -  7p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01448  -     7p14.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01448 - 7p14.1 [CytoView hg19]  LINC01448 - 7p14.1 [CytoView hg38]
Mapping of homologs : NCBILINC01448 [Mapview hg19]  LINC01448 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040864
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01448
Cluster EST : UnigeneHs.566753 [ NCBI ]
CGAP (NCI)Hs.566753
Alternative Splicing GalleryENSG00000238284
Gene ExpressionLINC01448 [ NCBI-GEO ]   LINC01448 [ EBI - ARRAY_EXPRESS ]   LINC01448 [ SEEK ]   LINC01448 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01448 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928795
GTEX Portal (Tissue expression)LINC01448
Human Protein AtlasENSG00000238284-LINC01448 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01448
DMDM Disease mutations101928795
Blocks (Seattle)LINC01448
Human Protein Atlas [tissue]ENSG00000238284-LINC01448 [tissue]
Protein Interaction databases
FunCoupENSG00000238284
BioGRIDLINC01448
STRING (EMBL)LINC01448
ZODIACLINC01448
Ontologies - Pathways
Huge Navigator LINC01448 [HugePedia]
snp3D : Map Gene to Disease101928795
BioCentury BCIQLINC01448
ClinGenLINC01448
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928795
Clinical trialLINC01448
Miscellaneous
canSAR (ICR)LINC01448 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01448
EVEXLINC01448
GoPubMedLINC01448
iHOPLINC01448
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:16:26 CET 2017

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