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LINC01449 (long intergenic non-protein coding RNA 1449)

Identity

Other alias-
HGNC (Hugo) LINC01449
LocusID (NCBI) 101928773
Atlas_Id 66004
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 41101604 and ends at 41133501 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01449   50791
Cards
Entrez_Gene (NCBI)LINC01449  101928773  long intergenic non-protein coding RNA 1449
Aliases
GeneCards (Weizmann)LINC01449
Ensembl hg19 (Hinxton)ENSG00000224017 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224017 [Gene_View]  chr7:41101604-41133501 [Contig_View]  LINC01449 [Vega]
ICGC DataPortalENSG00000224017
TCGA cBioPortalLINC01449
AceView (NCBI)LINC01449
Genatlas (Paris)LINC01449
WikiGenes101928773
SOURCE (Princeton)LINC01449
Genetics Home Reference (NIH)LINC01449
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01449  -     chr7:41101604-41133501 +  7p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01449  -     7p14.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01449 - 7p14.1 [CytoView hg19]  LINC01449 - 7p14.1 [CytoView hg38]
Mapping of homologs : NCBILINC01449 [Mapview hg19]  LINC01449 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC033981
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01449
Cluster EST : UnigeneHs.382363 [ NCBI ]
CGAP (NCI)Hs.382363
Alternative Splicing GalleryENSG00000224017
Gene ExpressionLINC01449 [ NCBI-GEO ]   LINC01449 [ EBI - ARRAY_EXPRESS ]   LINC01449 [ SEEK ]   LINC01449 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01449 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928773
GTEX Portal (Tissue expression)LINC01449
Human Protein AtlasENSG00000224017-LINC01449 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01449
DMDM Disease mutations101928773
Blocks (Seattle)LINC01449
Human Protein Atlas [tissue]ENSG00000224017-LINC01449 [tissue]
Protein Interaction databases
FunCoupENSG00000224017
BioGRIDLINC01449
STRING (EMBL)LINC01449
ZODIACLINC01449
Ontologies - Pathways
Huge Navigator LINC01449 [HugePedia]
snp3D : Map Gene to Disease101928773
BioCentury BCIQLINC01449
ClinGenLINC01449
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928773
Clinical trialLINC01449
Miscellaneous
canSAR (ICR)LINC01449 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01449
EVEXLINC01449
GoPubMedLINC01449
iHOPLINC01449
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:56:21 CET 2017

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