Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01471 (long intergenic non-protein coding RNA 1471)

Identity

Other alias-
HGNC (Hugo) LINC01471
LocusID (NCBI) 101927149
Atlas_Id 66014
Location 3q21.3  [Link to chromosome band 3q21]
Location_base_pair Starts at 127497601 and ends at 127537780 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01471   51106
Cards
Entrez_Gene (NCBI)LINC01471  101927149  long intergenic non-protein coding RNA 1471
Aliases
GeneCards (Weizmann)LINC01471
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:127497601-127537780 [Contig_View]  LINC01471 [Vega]
TCGA cBioPortalLINC01471
AceView (NCBI)LINC01471
Genatlas (Paris)LINC01471
WikiGenes101927149
SOURCE (Princeton)LINC01471
Genetics Home Reference (NIH)LINC01471
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01471  -     chr3:127497601-127537780 -  3q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01471  -     3q21.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01471 - 3q21.3 [CytoView hg19]  LINC01471 - 3q21.3 [CytoView hg38]
Mapping of homologs : NCBILINC01471 [Mapview hg19]  LINC01471 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098672 BX537548 DB037524
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01471
Cluster EST : UnigeneHs.407798 [ NCBI ]
CGAP (NCI)Hs.407798
Gene ExpressionLINC01471 [ NCBI-GEO ]   LINC01471 [ EBI - ARRAY_EXPRESS ]   LINC01471 [ SEEK ]   LINC01471 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01471 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927149
GTEX Portal (Tissue expression)LINC01471
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01471
DMDM Disease mutations101927149
Blocks (Seattle)LINC01471
Protein Interaction databases
BioGRIDLINC01471
STRING (EMBL)LINC01471
ZODIACLINC01471
Ontologies - Pathways
Huge Navigator LINC01471 [HugePedia]
snp3D : Map Gene to Disease101927149
BioCentury BCIQLINC01471
ClinGenLINC01471
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927149
Clinical trialLINC01471
Miscellaneous
canSAR (ICR)LINC01471 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01471
EVEXLINC01471
GoPubMedLINC01471
iHOPLINC01471
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:38 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.