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LINC01473 (long intergenic non-protein coding RNA 1473)

Identity

Other alias-
HGNC (Hugo) LINC01473
LocusID (NCBI) 101927217
Atlas_Id 66015
Location 2q32.1  [Link to chromosome band 2q32]
Location_base_pair Starts at 186033534 and ends at 186086317 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01473   51109
Cards
Entrez_Gene (NCBI)LINC01473  101927217  long intergenic non-protein coding RNA 1473
Aliases
GeneCards (Weizmann)LINC01473
Ensembl hg19 (Hinxton)ENSG00000237877 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237877 [Gene_View]  chr2:186033534-186086317 [Contig_View]  LINC01473 [Vega]
ICGC DataPortalENSG00000237877
TCGA cBioPortalLINC01473
AceView (NCBI)LINC01473
Genatlas (Paris)LINC01473
WikiGenes101927217
SOURCE (Princeton)LINC01473
Genetics Home Reference (NIH)LINC01473
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01473  -     chr2:186033534-186086317 -  2q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01473  -     2q32.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01473 - 2q32.1 [CytoView hg19]  LINC01473 - 2q32.1 [CytoView hg38]
Mapping of homologs : NCBILINC01473 [Mapview hg19]  LINC01473 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA886892 BM725722
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01473
Cluster EST : UnigeneHs.130011 [ NCBI ]
CGAP (NCI)Hs.130011
Alternative Splicing GalleryENSG00000237877
Gene ExpressionLINC01473 [ NCBI-GEO ]   LINC01473 [ EBI - ARRAY_EXPRESS ]   LINC01473 [ SEEK ]   LINC01473 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01473 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927217
GTEX Portal (Tissue expression)LINC01473
Human Protein AtlasENSG00000237877-LINC01473 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01473
DMDM Disease mutations101927217
Blocks (Seattle)LINC01473
Human Protein Atlas [tissue]ENSG00000237877-LINC01473 [tissue]
Protein Interaction databases
FunCoupENSG00000237877
BioGRIDLINC01473
STRING (EMBL)LINC01473
ZODIACLINC01473
Ontologies - Pathways
Huge Navigator LINC01473 [HugePedia]
snp3D : Map Gene to Disease101927217
BioCentury BCIQLINC01473
ClinGenLINC01473
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927217
Clinical trialLINC01473
Miscellaneous
canSAR (ICR)LINC01473 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01473
EVEXLINC01473
GoPubMedLINC01473
iHOPLINC01473
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:04 CET 2017

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