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LINC01474 (long intergenic non-protein coding RNA 1474)

Identity

Other alias-
HGNC (Hugo) LINC01474
LocusID (NCBI) 101927258
Atlas_Id 66016
Location 9q21.13  [Link to chromosome band 9q21]
Location_base_pair Starts at 75486645 and ends at 75489025 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01474   51111
Cards
Entrez_Gene (NCBI)LINC01474  101927258  long intergenic non-protein coding RNA 1474
Aliases
GeneCards (Weizmann)LINC01474
Ensembl hg19 (Hinxton)ENSG00000236849 [Gene_View]  chr9:75486645-75489025 [Contig_View]  LINC01474 [Vega]
Ensembl hg38 (Hinxton)ENSG00000236849 [Gene_View]  chr9:75486645-75489025 [Contig_View]  LINC01474 [Vega]
ICGC DataPortalENSG00000236849
TCGA cBioPortalLINC01474
AceView (NCBI)LINC01474
Genatlas (Paris)LINC01474
WikiGenes101927258
SOURCE (Princeton)LINC01474
Genetics Home Reference (NIH)LINC01474
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01474  -     chr9:75486645-75489025 -  9q21.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01474  -     9q21.13   [Description]    (hg38-Dec_2013)
EnsemblLINC01474 - 9q21.13 [CytoView hg19]  LINC01474 - 9q21.13 [CytoView hg38]
Mapping of homologs : NCBILINC01474 [Mapview hg19]  LINC01474 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA528517 BE391770 BE729650 BE893827 HG502135
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)LINC01474
Cluster EST : UnigeneHs.636707 [ NCBI ]
CGAP (NCI)Hs.636707
Alternative Splicing GalleryENSG00000236849
Gene ExpressionLINC01474 [ NCBI-GEO ]   LINC01474 [ EBI - ARRAY_EXPRESS ]   LINC01474 [ SEEK ]   LINC01474 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01474 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927258
GTEX Portal (Tissue expression)LINC01474
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01474
DMDM Disease mutations101927258
Blocks (Seattle)LINC01474
Human Protein AtlasENSG00000236849
Protein Interaction databases
FunCoupENSG00000236849
BioGRIDLINC01474
STRING (EMBL)LINC01474
ZODIACLINC01474
Ontologies - Pathways
Huge Navigator LINC01474 [HugePedia]
snp3D : Map Gene to Disease101927258
BioCentury BCIQLINC01474
ClinGenLINC01474
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927258
Clinical trialLINC01474
Miscellaneous
canSAR (ICR)LINC01474 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01474
EVEXLINC01474
GoPubMedLINC01474
iHOPLINC01474
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:14:00 CET 2017

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