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LINC01475 (long intergenic non-protein coding RNA 1475)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01475
LocusID (NCBI) 101927324
Atlas_Id 66017
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 99526350 and ends at 99531177 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01475   51113
Cards
Entrez_Gene (NCBI)LINC01475    long intergenic non-protein coding RNA 1475
Aliases
GeneCards (Weizmann)LINC01475
Ensembl hg19 (Hinxton)ENSG00000257582 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257582 [Gene_View]  ENSG00000257582 [Sequence]  chr10:99526350-99531177 [Contig_View]  LINC01475 [Vega]
ICGC DataPortalENSG00000257582
TCGA cBioPortalLINC01475
AceView (NCBI)LINC01475
Genatlas (Paris)LINC01475
SOURCE (Princeton)LINC01475
Genetics Home Reference (NIH)LINC01475
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01475  -     chr10:99526350-99531177 -  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01475  -     10q24.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC01475 - 10q24.2 [CytoView hg19]  LINC01475 - 10q24.2 [CytoView hg38]
ImmunoBaseENSG00000257582
Genome Data Viewer NCBILINC01475 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)DQ372722 DQ372723
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01475
Gene ExpressionLINC01475 [ NCBI-GEO ]   LINC01475 [ EBI - ARRAY_EXPRESS ]   LINC01475 [ SEEK ]   LINC01475 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01475 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01475 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927324
GTEX Portal (Tissue expression)LINC01475
Human Protein AtlasENSG00000257582-LINC01475 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01475
Human Protein Atlas [tissue]ENSG00000257582-LINC01475 [tissue]
Protein Interaction databases
BioGRIDLINC01475
STRING (EMBL)LINC01475
ZODIACLINC01475
Ontologies - Pathways
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01475
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:57:55 CEST 2021

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