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LINC01477 (long intergenic non-protein coding RNA 1477)

Identity

Other alias-
HGNC (Hugo) LINC01477
LocusID (NCBI) 101927900
Atlas_Id 66019
Location 18q12.3  [Link to chromosome band 18q12]
Location_base_pair Starts at 40066286 and ends at 40099233 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01477   51119
Cards
Entrez_Gene (NCBI)LINC01477  101927900  long intergenic non-protein coding RNA 1477
Aliases
GeneCards (Weizmann)LINC01477
Ensembl hg19 (Hinxton)ENSG00000261715 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261715 [Gene_View]  chr18:40066286-40099233 [Contig_View]  LINC01477 [Vega]
ICGC DataPortalENSG00000261715
TCGA cBioPortalLINC01477
AceView (NCBI)LINC01477
Genatlas (Paris)LINC01477
WikiGenes101927900
SOURCE (Princeton)LINC01477
Genetics Home Reference (NIH)LINC01477
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01477  -     chr18:40066286-40099233 +  18q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01477  -     18q12.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01477 - 18q12.3 [CytoView hg19]  LINC01477 - 18q12.3 [CytoView hg38]
Mapping of homologs : NCBILINC01477 [Mapview hg19]  LINC01477 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC034625 BC045816
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01477
Cluster EST : UnigeneHs.385522 [ NCBI ]
CGAP (NCI)Hs.385522
Alternative Splicing GalleryENSG00000261715
Gene ExpressionLINC01477 [ NCBI-GEO ]   LINC01477 [ EBI - ARRAY_EXPRESS ]   LINC01477 [ SEEK ]   LINC01477 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01477 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927900
GTEX Portal (Tissue expression)LINC01477
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01477
DMDM Disease mutations101927900
Blocks (Seattle)LINC01477
Human Protein AtlasENSG00000261715
Protein Interaction databases
FunCoupENSG00000261715
BioGRIDLINC01477
STRING (EMBL)LINC01477
ZODIACLINC01477
Ontologies - Pathways
Huge Navigator LINC01477 [HugePedia]
snp3D : Map Gene to Disease101927900
BioCentury BCIQLINC01477
ClinGenLINC01477
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927900
Clinical trialLINC01477
Miscellaneous
canSAR (ICR)LINC01477 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01477
EVEXLINC01477
GoPubMedLINC01477
iHOPLINC01477
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:59:07 CEST 2017

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