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LINC01478 (long intergenic non-protein coding RNA 1478)

Identity

Other alias-
HGNC (Hugo) LINC01478
LocusID (NCBI) 101927921
Atlas_Id 66020
Location 18q12.3  [Link to chromosome band 18q12]
Location_base_pair Starts at 41903400 and ends at 42111662 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01478   51121
Cards
Entrez_Gene (NCBI)LINC01478  101927921  long intergenic non-protein coding RNA 1478
Aliases
GeneCards (Weizmann)LINC01478
Ensembl hg19 (Hinxton)ENSG00000267337 [Gene_View]  chr18:41903400-42111662 [Contig_View]  LINC01478 [Vega]
Ensembl hg38 (Hinxton)ENSG00000267337 [Gene_View]  chr18:41903400-42111662 [Contig_View]  LINC01478 [Vega]
ICGC DataPortalENSG00000267337
TCGA cBioPortalLINC01478
AceView (NCBI)LINC01478
Genatlas (Paris)LINC01478
WikiGenes101927921
SOURCE (Princeton)LINC01478
Genetics Home Reference (NIH)LINC01478
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01478  -     chr18:41903400-42111662 -  18q12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01478  -     18q12.3   [Description]    (hg38-Dec_2013)
EnsemblLINC01478 - 18q12.3 [CytoView hg19]  LINC01478 - 18q12.3 [CytoView hg38]
Mapping of homologs : NCBILINC01478 [Mapview hg19]  LINC01478 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC051727 DB037088 HG509959 HG509960 HY218918
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010966 NW_004929410
Consensus coding sequences : CCDS (NCBI)LINC01478
Cluster EST : UnigeneHs.464986 [ NCBI ]
CGAP (NCI)Hs.464986
Alternative Splicing GalleryENSG00000267337
Gene ExpressionLINC01478 [ NCBI-GEO ]   LINC01478 [ EBI - ARRAY_EXPRESS ]   LINC01478 [ SEEK ]   LINC01478 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01478 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927921
GTEX Portal (Tissue expression)LINC01478
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01478
DMDM Disease mutations101927921
Blocks (Seattle)LINC01478
Human Protein AtlasENSG00000267337
Protein Interaction databases
FunCoupENSG00000267337
BioGRIDLINC01478
STRING (EMBL)LINC01478
ZODIACLINC01478
Ontologies - Pathways
Huge Navigator LINC01478 [HugePedia]
snp3D : Map Gene to Disease101927921
BioCentury BCIQLINC01478
ClinGenLINC01478
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927921
Clinical trialLINC01478
Miscellaneous
canSAR (ICR)LINC01478 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01478
EVEXLINC01478
GoPubMedLINC01478
iHOPLINC01478
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:14:01 CET 2017

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