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LINC01479 (long intergenic non-protein coding RNA 1479)

Identity

Other aliasHRAT39
HGNC (Hugo) LINC01479
LocusID (NCBI) 101927922
Atlas_Id 66021
Location 12q15  [Link to chromosome band 12q15]
Location_base_pair Starts at 67929235 and ends at 67970017 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01479   51123
Cards
Entrez_Gene (NCBI)LINC01479  101927922  long intergenic non-protein coding RNA 1479
AliasesHRAT39
GeneCards (Weizmann)LINC01479
Ensembl hg19 (Hinxton)ENSG00000255772 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255772 [Gene_View]  chr12:67929235-67970017 [Contig_View]  LINC01479 [Vega]
ICGC DataPortalENSG00000255772
TCGA cBioPortalLINC01479
AceView (NCBI)LINC01479
Genatlas (Paris)LINC01479
WikiGenes101927922
SOURCE (Princeton)LINC01479
Genetics Home Reference (NIH)LINC01479
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01479  -     chr12:67929235-67970017 +  12q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01479  -     12q15   [Description]    (hg19-Feb_2009)
EnsemblLINC01479 - 12q15 [CytoView hg19]  LINC01479 - 12q15 [CytoView hg38]
Mapping of homologs : NCBILINC01479 [Mapview hg19]  LINC01479 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM850770 BX107064
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01479
Cluster EST : UnigeneHs.450769 [ NCBI ]
CGAP (NCI)Hs.450769
Alternative Splicing GalleryENSG00000255772
Gene ExpressionLINC01479 [ NCBI-GEO ]   LINC01479 [ EBI - ARRAY_EXPRESS ]   LINC01479 [ SEEK ]   LINC01479 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01479 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927922
GTEX Portal (Tissue expression)LINC01479
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01479
DMDM Disease mutations101927922
Blocks (Seattle)LINC01479
Human Protein AtlasENSG00000255772
Protein Interaction databases
FunCoupENSG00000255772
BioGRIDLINC01479
STRING (EMBL)LINC01479
ZODIACLINC01479
Ontologies - Pathways
Huge Navigator LINC01479 [HugePedia]
snp3D : Map Gene to Disease101927922
BioCentury BCIQLINC01479
ClinGenLINC01479
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927922
Clinical trialLINC01479
Miscellaneous
canSAR (ICR)LINC01479 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01479
EVEXLINC01479
GoPubMedLINC01479
iHOPLINC01479
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:59:08 CEST 2017

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