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LINC01489 (long intergenic non-protein coding RNA 1489)

Identity

Other alias-
HGNC (Hugo) LINC01489
LocusID (NCBI) 101928340
Atlas_Id 66031
Location 12p12.3  [Link to chromosome band 12p12]
Location_base_pair Starts at 15001833 and ends at 15006683 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01489   51145
Cards
Entrez_Gene (NCBI)LINC01489  101928340  long intergenic non-protein coding RNA 1489
Aliases
GeneCards (Weizmann)LINC01489
Ensembl hg19 (Hinxton)ENSG00000255727 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255727 [Gene_View]  chr12:15001833-15006683 [Contig_View]  LINC01489 [Vega]
ICGC DataPortalENSG00000255727
TCGA cBioPortalLINC01489
AceView (NCBI)LINC01489
Genatlas (Paris)LINC01489
WikiGenes101928340
SOURCE (Princeton)LINC01489
Genetics Home Reference (NIH)LINC01489
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01489  -     chr12:15001833-15006683 +  12p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01489  -     12p12.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01489 - 12p12.3 [CytoView hg19]  LINC01489 - 12p12.3 [CytoView hg38]
Mapping of homologs : NCBILINC01489 [Mapview hg19]  LINC01489 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA056540 AA056644
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01489
Cluster EST : UnigeneHs.401232 [ NCBI ]
CGAP (NCI)Hs.401232
Alternative Splicing GalleryENSG00000255727
Gene ExpressionLINC01489 [ NCBI-GEO ]   LINC01489 [ EBI - ARRAY_EXPRESS ]   LINC01489 [ SEEK ]   LINC01489 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01489 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928340
GTEX Portal (Tissue expression)LINC01489
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01489
DMDM Disease mutations101928340
Blocks (Seattle)LINC01489
Human Protein AtlasENSG00000255727
Protein Interaction databases
FunCoupENSG00000255727
BioGRIDLINC01489
STRING (EMBL)LINC01489
ZODIACLINC01489
Ontologies - Pathways
Huge Navigator LINC01489 [HugePedia]
snp3D : Map Gene to Disease101928340
BioCentury BCIQLINC01489
ClinGenLINC01489
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928340
Clinical trialLINC01489
Miscellaneous
canSAR (ICR)LINC01489 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01489
EVEXLINC01489
GoPubMedLINC01489
iHOPLINC01489
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:59:10 CEST 2017

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