Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01493 (long intergenic non-protein coding RNA 1493)

Identity

Other alias-
HGNC (Hugo) LINC01493
LocusID (NCBI) 101928536
Atlas_Id 66035
Location 11p12  [Link to chromosome band 11p12]
Location_base_pair Starts at 38648858 and ends at 38655249 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01493   51150
Cards
Entrez_Gene (NCBI)LINC01493  101928536  long intergenic non-protein coding RNA 1493
Aliases
GeneCards (Weizmann)LINC01493
Ensembl hg19 (Hinxton)ENSG00000254562 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254562 [Gene_View]  chr11:38648858-38655249 [Contig_View]  LINC01493 [Vega]
ICGC DataPortalENSG00000254562
TCGA cBioPortalLINC01493
AceView (NCBI)LINC01493
Genatlas (Paris)LINC01493
WikiGenes101928536
SOURCE (Princeton)LINC01493
Genetics Home Reference (NIH)LINC01493
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01493  -     chr11:38648858-38655249 +  11p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01493  -     11p12   [Description]    (hg19-Feb_2009)
EnsemblLINC01493 - 11p12 [CytoView hg19]  LINC01493 - 11p12 [CytoView hg38]
Mapping of homologs : NCBILINC01493 [Mapview hg19]  LINC01493 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI218577 BX099902
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01493
Cluster EST : UnigeneHs.144776 [ NCBI ]
CGAP (NCI)Hs.144776
Alternative Splicing GalleryENSG00000254562
Gene ExpressionLINC01493 [ NCBI-GEO ]   LINC01493 [ EBI - ARRAY_EXPRESS ]   LINC01493 [ SEEK ]   LINC01493 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01493 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928536
GTEX Portal (Tissue expression)LINC01493
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01493
DMDM Disease mutations101928536
Blocks (Seattle)LINC01493
Human Protein AtlasENSG00000254562
Protein Interaction databases
FunCoupENSG00000254562
BioGRIDLINC01493
STRING (EMBL)LINC01493
ZODIACLINC01493
Ontologies - Pathways
Huge Navigator LINC01493 [HugePedia]
snp3D : Map Gene to Disease101928536
BioCentury BCIQLINC01493
ClinGenLINC01493
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928536
Clinical trialLINC01493
Miscellaneous
canSAR (ICR)LINC01493 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01493
EVEXLINC01493
GoPubMedLINC01493
iHOPLINC01493
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:59:11 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.