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LINC01494 (long intergenic non-protein coding RNA 1494)

Identity

Other alias-
HGNC (Hugo) LINC01494
LocusID (NCBI) 101928537
Atlas_Id 66036
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 218900815 and ends at 218930637 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01494   51152
Cards
Entrez_Gene (NCBI)LINC01494  101928537  long intergenic non-protein coding RNA 1494
Aliases
GeneCards (Weizmann)LINC01494
Ensembl hg19 (Hinxton)ENSG00000228135 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228135 [Gene_View]  chr2:218900815-218930637 [Contig_View]  LINC01494 [Vega]
ICGC DataPortalENSG00000228135
TCGA cBioPortalLINC01494
AceView (NCBI)LINC01494
Genatlas (Paris)LINC01494
WikiGenes101928537
SOURCE (Princeton)LINC01494
Genetics Home Reference (NIH)LINC01494
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01494  -     chr2:218900815-218930637 -  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01494  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblLINC01494 - 2q35 [CytoView hg19]  LINC01494 - 2q35 [CytoView hg38]
Mapping of homologs : NCBILINC01494 [Mapview hg19]  LINC01494 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038542 BI488698
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01494
Cluster EST : UnigeneHs.611129 [ NCBI ]
CGAP (NCI)Hs.611129
Alternative Splicing GalleryENSG00000228135
Gene ExpressionLINC01494 [ NCBI-GEO ]   LINC01494 [ EBI - ARRAY_EXPRESS ]   LINC01494 [ SEEK ]   LINC01494 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01494 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928537
GTEX Portal (Tissue expression)LINC01494
Human Protein AtlasENSG00000228135-LINC01494 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01494
DMDM Disease mutations101928537
Blocks (Seattle)LINC01494
Human Protein Atlas [tissue]ENSG00000228135-LINC01494 [tissue]
Protein Interaction databases
FunCoupENSG00000228135
BioGRIDLINC01494
STRING (EMBL)LINC01494
ZODIACLINC01494
Ontologies - Pathways
Huge Navigator LINC01494 [HugePedia]
snp3D : Map Gene to Disease101928537
BioCentury BCIQLINC01494
ClinGenLINC01494
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928537
Clinical trialLINC01494
Miscellaneous
canSAR (ICR)LINC01494 (select the gene name)
Probes
FONT0CĪLOR=#00004F>Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01494
EVEXLINC01494
GoPubMedLINC01494
iHOPLINC01494
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:04 CET 2017

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