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LINC01496 (long intergenic non-protein coding RNA 1496)

Identity

Other alias-
HGNC (Hugo) LINC01496
LocusID (NCBI) 102723426
Atlas_Id 66038
Location Xp11.22  [Link to chromosome band Xp11]
Location_base_pair Starts at 51499909 and ends at 51507441 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01496   51162
Cards
Entrez_Gene (NCBI)LINC01496  102723426  long intergenic non-protein coding RNA 1496
Aliases
GeneCards (Weizmann)LINC01496
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:51499909-51507441 [Contig_View]  LINC01496 [Vega]
TCGA cBioPortalLINC01496
AceView (NCBI)LINC01496
Genatlas (Paris)LINC01496
WikiGenes102723426
SOURCE (Princeton)LINC01496
Genetics Home Reference (NIH)LINC01496
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01496  -     chrX:51499909-51507441 -  Xp11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01496  -     Xp11.22   [Description]    (hg19-Feb_2009)
EnsemblLINC01496 - Xp11.22 [CytoView hg19]  LINC01496 - Xp11.22 [CytoView hg38]
Mapping of homologs : NCBILINC01496 [Mapview hg19]  LINC01496 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA683332 DB061072
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01496
Cluster EST : UnigeneHs.584513 [ NCBI ]
CGAP (NCI)Hs.584513
Gene ExpressionLINC01496 [ NCBI-GEO ]   LINC01496 [ EBI - ARRAY_EXPRESS ]   LINC01496 [ SEEK ]   LINC01496 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01496 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102723426
GTEX Portal (Tissue expression)LINC01496
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01496
DMDM Disease mutations102723426
Blocks (Seattle)LINC01496
Protein Interaction databases
BioGRIDLINC01496
STRING (EMBL)LINC01496
ZODIACLINC01496
Ontologies - Pathways
Huge Navigator LINC01496 [HugePedia]
snp3D : Map Gene to Disease102723426
BioCentury BCIQLINC01496
ClinGenLINC01496
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723426
Clinical trialLINC01496
Miscellaneous
canSAR (ICR)LINC01496 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01496
EVEXLINC01496
GoPubMedLINC01496
iHOPLINC01496
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:39:15 CET 2017

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