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LINC01499 (long intergenic non-protein coding RNA 1499)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01499
LocusID (NCBI) 102723644
Atlas_Id 66041
Location 11p12  [Link to chromosome band 11p12]
Location_base_pair Starts at 41714568 and ends at 41836442 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01499   51165
Cards
Entrez_Gene (NCBI)LINC01499    long intergenic non-protein coding RNA 1499
Aliases
GeneCards (Weizmann)LINC01499
Ensembl hg19 (Hinxton)ENSG00000255171 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255171 [Gene_View]  ENSG00000255171 [Sequence]  chr11:41714568-41836442 [Contig_View]  LINC01499 [Vega]
ICGC DataPortalENSG00000255171
TCGA cBioPortalLINC01499
AceView (NCBI)LINC01499
Genatlas (Paris)LINC01499
SOURCE (Princeton)LINC01499
Genetics Home Reference (NIH)LINC01499
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01499  -     chr11:41714568-41836442 +  11p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01499  -     11p12   [Description]    (hg19-Feb_2009)
GoldenPathLINC01499 - 11p12 [CytoView hg19]  LINC01499 - 11p12 [CytoView hg38]
ImmunoBaseENSG00000255171
genome Data Viewer NCBILINC01499 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)DB021385 DB032745
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01499
Alternative Splicing GalleryENSG00000255171
Gene ExpressionLINC01499 [ NCBI-GEO ]   LINC01499 [ EBI - ARRAY_EXPRESS ]   LINC01499 [ SEEK ]   LINC01499 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01499 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01499 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102723644
GTEX Portal (Tissue expression)LINC01499
Human Protein AtlasENSG00000255171-LINC01499 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01499
Blocks (Seattle)LINC01499
Human Protein Atlas [tissue]ENSG00000255171-LINC01499 [tissue]
Protein Interaction databases
BioGRIDLINC01499
STRING (EMBL)LINC01499
ZODIACLINC01499
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01499
EVEXLINC01499
GoPubMedLINC01499
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:02:31 CET 2020

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