Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01499 (long intergenic non-protein coding RNA 1499)


Alias (NCBI)-
HGNC (Hugo) LINC01499
LocusID (NCBI) 102723644
Atlas_Id 66041
Location 11p12  [Link to chromosome band 11p12]
Location_base_pair Starts at 41714568 and ends at 41836442 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01499   51165
Entrez_Gene (NCBI)LINC01499    long intergenic non-protein coding RNA 1499
GeneCards (Weizmann)LINC01499
Ensembl hg19 (Hinxton)ENSG00000255171 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255171 [Gene_View]  ENSG00000255171 [Sequence]  chr11:41714568-41836442 [Contig_View]  LINC01499 [Vega]
ICGC DataPortalENSG00000255171
TCGA cBioPortalLINC01499
AceView (NCBI)LINC01499
Genatlas (Paris)LINC01499
SOURCE (Princeton)LINC01499
Genetics Home Reference (NIH)LINC01499
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01499  -     chr11:41714568-41836442 +  11p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01499  -     11p12   [Description]    (hg19-Feb_2009)
GoldenPathLINC01499 - 11p12 [CytoView hg19]  LINC01499 - 11p12 [CytoView hg38]
genome Data Viewer NCBILINC01499 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)DB021385 DB032745
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01499
Alternative Splicing GalleryENSG00000255171
Gene ExpressionLINC01499 [ NCBI-GEO ]   LINC01499 [ EBI - ARRAY_EXPRESS ]   LINC01499 [ SEEK ]   LINC01499 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01499 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01499 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102723644
GTEX Portal (Tissue expression)LINC01499
Human Protein AtlasENSG00000255171-LINC01499 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01499
Blocks (Seattle)LINC01499
Human Protein Atlas [tissue]ENSG00000255171-LINC01499 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:02:31 CET 2020

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