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LINC01506 (long intergenic non-protein coding RNA 1506)

Identity

Other alias-
HGNC (Hugo) LINC01506
LocusID (NCBI) 101927015
Atlas_Id 66048
Location 9q21.11  [Link to chromosome band 9q21]
Location_base_pair Starts at 68543541 and ends at 68546602 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01506   51187
Cards
Entrez_Gene (NCBI)LINC01506  101927015  long intergenic non-protein coding RNA 1506
Aliases
GeneCards (Weizmann)LINC01506
Ensembl hg19 (Hinxton)ENSG00000234506 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234506 [Gene_View]  chr9:68543541-68546602 [Contig_View]  LINC01506 [Vega]
ICGC DataPortalENSG00000234506
TCGA cBioPortalLINC01506
AceView (NCBI)LINC01506
Genatlas (Paris)LINC01506
WikiGenes101927015
SOURCE (Princeton)LINC01506
Genetics Home Reference (NIH)LINC01506
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01506  -     chr9:68543541-68546602 -  9q21.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01506  -     9q21.11   [Description]    (hg19-Feb_2009)
EnsemblLINC01506 - 9q21.11 [CytoView hg19]  LINC01506 - 9q21.11 [CytoView hg38]
Mapping of homologs : NCBILINC01506 [Mapview hg19]  LINC01506 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CR745134
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01506
Cluster EST : UnigeneHs.406454 [ NCBI ]
CGAP (NCI)Hs.406454
Alternative Splicing GalleryENSG00000234506
Gene ExpressionLINC01506 [ NCBI-GEO ]   LINC01506 [ EBI - ARRAY_EXPRESS ]   LINC01506 [ SEEK ]   LINC01506 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01506 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927015
GTEX Portal (Tissue expression)LINC01506
Human Protein AtlasENSG00000234506-LINC01506 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01506
DMDM Disease mutations101927015
Blocks (Seattle)LINC01506
Human Protein Atlas [tissue]ENSG00000234506-LINC01506 [tissue]
Protein Interaction databases
FunCoupENSG00000234506
BioGRIDLINC01506
STRING (EMBL)LINC01506
ZODIACLINC01506
Ontologies - Pathways
Huge Navigator LINC01506 [HugePedia]
snp3D : Map Gene to Disease101927015
BioCentury BCIQLINC01506
ClinGenLINC01506
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927015
Clinical trialLINC01506
Miscellaneous
canSAR (ICR)LINC01506 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01506
EVEXLINC01506
GoPubMedLINC01506
iHOPLINC01506
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:39:18 CET 2017

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