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LINC01508 (long intergenic non-protein coding RNA 1508)

Identity

Other alias-
HGNC (Hugo) LINC01508
LocusID (NCBI) 101927873
Atlas_Id 66050
Location 9q22.2  [Link to chromosome band 9q22]
Location_base_pair Starts at 90300896 and ends at 90433489 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01508   51190
Cards
Entrez_Gene (NCBI)LINC01508  101927873  long intergenic non-protein coding RNA 1508
Aliases
GeneCards (Weizmann)LINC01508
Ensembl hg19 (Hinxton)ENSG00000231107 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231107 [Gene_View]  chr9:90300896-90433489 [Contig_View]  LINC01508 [Vega]
ICGC DataPortalENSG00000231107
TCGA cBioPortalLINC01508
AceView (NCBI)LINC01508
Genatlas (Paris)LINC01508
WikiGenes101927873
SOURCE (Princeton)LINC01508
Genetics Home Reference (NIH)LINC01508
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01508  -     chr9:90300896-90433489 -  9q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01508  -     9q22.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01508 - 9q22.2 [CytoView hg19]  LINC01508 - 9q22.2 [CytoView hg38]
Mapping of homologs : NCBILINC01508 [Mapview hg19]  LINC01508 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA167811 BG219729
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01508
Cluster EST : UnigeneHs.598482 [ NCBI ]
CGAP (NCI)Hs.598482
Alternative Splicing GalleryENSG00000231107
Gene ExpressionLINC01508 [ NCBI-GEO ]   LINC01508 [ EBI - ARRAY_EXPRESS ]   LINC01508 [ SEEK ]   LINC01508 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01508 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927873
GTEX Portal (Tissue expression)LINC01508
Human Protein AtlasENSG00000231107-LINC01508 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01508
DMDM Disease mutations101927873
Blocks (Seattle)LINC01508
Human Protein Atlas [tissue]ENSG00000231107-LINC01508 [tissue]
Protein Interaction databases
FunCoupENSG00000231107
BioGRIDLINC01508
STRING (EMBL)LINC01508
ZODIACLINC01508
Ontologies - Pathways
Huge Navigator LINC01508 [HugePedia]
snp3D : Map Gene to Disease101927873
BioCentury BCIQLINC01508
ClinGenLINC01508
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927873
Clinical trialLINC01508
Miscellaneous
canSAR (ICR)LINC01508 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01508
EVEXLINC01508
GoPubMedLINC01508
iHOPLINC01508
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:39:18 CET 2017

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