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LINC01509 (long intergenic non-protein coding RNA 1509)

Identity

Other aliasPRCAT37
HGNC (Hugo) LINC01509
LocusID (NCBI) 101928720
Atlas_Id 66051
Location 9q31.2  [Link to chromosome band 9q31]
Location_base_pair Starts at 107420284 and ends at 107466585 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01509   51193
Cards
Entrez_Gene (NCBI)LINC01509  101928720  long intergenic non-protein coding RNA 1509
AliasesPRCAT37
GeneCards (Weizmann)LINC01509
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:107420284-107466585 [Contig_View]  LINC01509 [Vega]
TCGA cBioPortalLINC01509
AceView (NCBI)LINC01509
Genatlas (Paris)LINC01509
WikiGenes101928720
SOURCE (Princeton)LINC01509
Genetics Home Reference (NIH)LINC01509
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01509  -     chr9:107420284-107466585 -  9q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01509  -     9q31.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01509 - 9q31.2 [CytoView hg19]  LINC01509 - 9q31.2 [CytoView hg38]
Mapping of homologs : NCBILINC01509 [Mapview hg19]  LINC01509 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX109000 CR740219
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01509
Cluster EST : UnigeneHs.125496 [ NCBI ]
CGAP (NCI)Hs.125496
Gene ExpressionLINC01509 [ NCBI-GEO ]   LINC01509 [ EBI - ARRAY_EXPRESS ]   LINC01509 [ SEEK ]   LINC01509 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01509 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928720
GTEX Portal (Tissue expression)LINC01509
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01509
DMDM Disease mutations101928720
Blocks (Seattle)LINC01509
Protein Interaction databases
BioGRIDLINC01509
STRING (EMBL)LINC01509
ZODIACLINC01509
Ontologies - Pathways
Huge Navigator LINC01509 [HugePedia]
snp3D : Map Gene to Disease101928720
BioCentury BCIQLINC01509
ClinGenLINC01509
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928720
Clinical trialLINC01509
Miscellaneous
canSAR (ICR)LINC01509 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01509
EVEXLINC01509
GoPubMedLINC01509
iHOPLINC01509
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:56:31 CET 2017

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