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LINC01512 (long intergenic non-protein coding RNA 1512)

Identity

Other aliasHI-LNC77
HGNC (Hugo) LINC01512
LocusID (NCBI) 100132354
Atlas_Id 57340
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 43891028 and ends at 43938207 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01512   51201
Cards
Entrez_Gene (NCBI)LINC01512  100132354  long intergenic non-protein coding RNA 1512
AliasesHI-LNC77
GeneCards (Weizmann)LINC01512
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:43891028-43938207 [Contig_View]  LINC01512 [Vega]
TCGA cBioPortalLINC01512
AceView (NCBI)LINC01512
Genatlas (Paris)LINC01512
WikiGenes100132354
SOURCE (Princeton)LINC01512
Genetics Home Reference (NIH)LINC01512
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01512  -     chr6:43891028-43938207 +  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01512  -     6p21.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01512 - 6p21.1 [CytoView hg19]  LINC01512 - 6p21.1 [CytoView hg38]
Mapping of homologs : NCBILINC01512 [Mapview hg19]  LINC01512 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095548
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01512
Cluster EST : UnigeneHs.376232 [ NCBI ]
CGAP (NCI)Hs.376232
Gene ExpressionLINC01512 [ NCBI-GEO ]   LINC01512 [ EBI - ARRAY_EXPRESS ]   LINC01512 [ SEEK ]   LINC01512 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01512 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132354
GTEX Portal (Tissue expression)LINC01512
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01512
DMDM Disease mutations100132354
Blocks (Seattle)LINC01512
IPIIPI00167644   
Protein Interaction databases
BioGRIDLINC01512
STRING (EMBL)LINC01512
ZODIACLINC01512
Ontologies - Pathways
Huge Navigator LINC01512 [HugePedia]
snp3D : Map Gene to Disease100132354
BioCentury BCIQLINC01512
ClinGenLINC01512
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132354
Clinical trialLINC01512
Miscellaneous
canSAR (ICR)LINC01512 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01512
EVEXLINC01512
GoPubMedLINC01512
iHOPLINC01512
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:16:45 CET 2018

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