Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01515 (long intergenic non-protein coding RNA 1515)


Alias (NCBI)-
HGNC (Hugo) LINC01515
LocusID (NCBI) 101928913
Atlas_Id 66056
Location 10q21.3  [Link to chromosome band 10q21]
Location_base_pair Starts at 65571425 and ends at 65766541 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01515   51210
Entrez_Gene (NCBI)LINC01515    long intergenic non-protein coding RNA 1515
GeneCards (Weizmann)LINC01515
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:65571425-65766541 [Contig_View]  LINC01515 [Vega]
TCGA cBioPortalLINC01515
AceView (NCBI)LINC01515
Genatlas (Paris)LINC01515
SOURCE (Princeton)LINC01515
Genetics Home Reference (NIH)LINC01515
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01515  -     chr10:65571425-65766541 +  10q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01515  -     10q21.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01515 - 10q21.3 [CytoView hg19]  LINC01515 - 10q21.3 [CytoView hg38]
Genome Data Viewer NCBILINC01515 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)CD104896 CN411464 DA381152 OA985746 OA985747
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01515
Gene ExpressionLINC01515 [ NCBI-GEO ]   LINC01515 [ EBI - ARRAY_EXPRESS ]   LINC01515 [ SEEK ]   LINC01515 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01515 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01515 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928913
GTEX Portal (Tissue expression)LINC01515
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01515
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:58:02 CEST 2021

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