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LINC01519 (long intergenic non-protein coding RNA 1519)

Identity

Other alias-
HGNC (Hugo) LINC01519
LocusID (NCBI) 101929624
Atlas_Id 66060
Location 10q23.1  [Link to chromosome band 10q23]
Location_base_pair Starts at 85193421 and ends at 85198938 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01519   51217
Cards
Entrez_Gene (NCBI)LINC01519  101929624  long intergenic non-protein coding RNA 1519
Aliases
GeneCards (Weizmann)LINC01519
Ensembl hg19 (Hinxton)ENSG00000237267 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237267 [Gene_View]  chr10:85193421-85198938 [Contig_View]  LINC01519 [Vega]
ICGC DataPortalENSG00000237267
TCGA cBioPortalLINC01519
AceView (NCBI)LINC01519
Genatlas (Paris)LINC01519
WikiGenes101929624
SOURCE (Princeton)LINC01519
Genetics Home Reference (NIH)LINC01519
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01519  -     chr10:85193421-85198938 -  10q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01519  -     10q23.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01519 - 10q23.1 [CytoView hg19]  LINC01519 - 10q23.1 [CytoView hg38]
Mapping of homologs : NCBILINC01519 [Mapview hg19]  LINC01519 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097624 DB052785
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01519
Cluster EST : UnigeneHs.638401 [ NCBI ]
CGAP (NCI)Hs.638401
Alternative Splicing GalleryENSG00000237267
Gene ExpressionLINC01519 [ NCBI-GEO ]   LINC01519 [ EBI - ARRAY_EXPRESS ]   LINC01519 [ SEEK ]   LINC01519 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01519 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929624
GTEX Portal (Tissue expression)LINC01519
Human Protein AtlasENSG00000237267-LINC01519 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01519
DMDM Disease mutations101929624
Blocks (Seattle)LINC01519
Human Protein Atlas [tissue]ENSG00000237267-LINC01519 [tissue]
Protein Interaction databases
FunCoupENSG00000237267
BioGRIDLINC01519
STRING (EMBL)LINC01519
ZODIACLINC01519
Ontologies - Pathways
Huge Navigator LINC01519 [HugePedia]
snp3D : Map Gene to Disease101929624
BioCentury BCIQLINC01519
ClinGenLINC01519
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929624
Clinical trialLINC01519
Miscellaneous
canSAR (ICR)LINC01519 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01519
EVEXLINC01519
GoPubMedLINC01519
iHOPLINC01519
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:21:57 CET 2017

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