Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01520 (long intergenic non-protein coding RNA 1520)


Alias (NCBI)-
HGNC (Hugo) LINC01520
LocusID (NCBI) 101929684
Atlas_Id 66061
Location 10q23.1  [Link to chromosome band 10q23]
Location_base_pair Starts at 85449592 and ends at 85492001 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01520   51218
Entrez_Gene (NCBI)LINC01520    long intergenic non-protein coding RNA 1520
GeneCards (Weizmann)LINC01520
Ensembl hg19 (Hinxton)ENSG00000230962 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230962 [Gene_View]  ENSG00000230962 [Sequence]  chr10:85449592-85492001 [Contig_View]  LINC01520 [Vega]
ICGC DataPortalENSG00000230962
TCGA cBioPortalLINC01520
AceView (NCBI)LINC01520
Genatlas (Paris)LINC01520
SOURCE (Princeton)LINC01520
Genetics Home Reference (NIH)LINC01520
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01520  -     chr10:85449592-85492001 +  10q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01520  -     10q23.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01520 - 10q23.1 [CytoView hg19]  LINC01520 - 10q23.1 [CytoView hg38]
Genome Data Viewer NCBILINC01520 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL117638 BG195264
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01520
Gene ExpressionLINC01520 [ NCBI-GEO ]   LINC01520 [ EBI - ARRAY_EXPRESS ]   LINC01520 [ SEEK ]   LINC01520 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01520 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01520 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101929684
GTEX Portal (Tissue expression)LINC01520
Human Protein AtlasENSG00000230962-LINC01520 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01520
Human Protein Atlas [tissue]ENSG00000230962-LINC01520 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:58:03 CEST 2021

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