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LINC01520 (long intergenic non-protein coding RNA 1520)

Identity

Other alias-
HGNC (Hugo) LINC01520
LocusID (NCBI) 101929684
Atlas_Id 66061
Location 10q23.1  [Link to chromosome band 10q23]
Location_base_pair Starts at 87209349 and ends at 87251758 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01520   51218
Cards
Entrez_Gene (NCBI)LINC01520  101929684  long intergenic non-protein coding RNA 1520
Aliases
GeneCards (Weizmann)LINC01520
Ensembl hg19 (Hinxton)ENSG00000230962 [Gene_View]  chr10:87209349-87251758 [Contig_View]  LINC01520 [Vega]
Ensembl hg38 (Hinxton)ENSG00000230962 [Gene_View]  chr10:87209349-87251758 [Contig_View]  LINC01520 [Vega]
ICGC DataPortalENSG00000230962
TCGA cBioPortalLINC01520
AceView (NCBI)LINC01520
Genatlas (Paris)LINC01520
WikiGenes101929684
SOURCE (Princeton)LINC01520
Genetics Home Reference (NIH)LINC01520
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01520  -     chr10:87209349-87251758 +  10q23.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01520  -     10q23.1   [Description]    (hg38-Dec_2013)
EnsemblLINC01520 - 10q23.1 [CytoView hg19]  LINC01520 - 10q23.1 [CytoView hg38]
Mapping of homologs : NCBILINC01520 [Mapview hg19]  LINC01520 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL117638 BG195264 HG503099
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)LINC01520
Cluster EST : UnigeneHs.736667 [ NCBI ]
CGAP (NCI)Hs.736667
Alternative Splicing GalleryENSG00000230962
Gene ExpressionLINC01520 [ NCBI-GEO ]   LINC01520 [ EBI - ARRAY_EXPRESS ]   LINC01520 [ SEEK ]   LINC01520 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01520 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929684
GTEX Portal (Tissue expression)LINC01520
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01520
DMDM Disease mutations101929684
Blocks (Seattle)LINC01520
Human Protein AtlasENSG00000230962
Protein Interaction databases
FunCoupENSG00000230962
BioGRIDLINC01520
STRING (EMBL)LINC01520
ZODIACLINC01520
Ontologies - Pathways
Huge Navigator LINC01520 [HugePedia]
snp3D : Map Gene to Disease101929684
BioCentury BCIQLINC01520
ClinGenLINC01520
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929684
Clinical trialLINC01520
Miscellaneous
canSAR (ICR)LINC01520 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01520
EVEXLINC01520
GoPubMedLINC01520
iHOPLINC01520
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:14:10 CET 2017

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