Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01521 (long intergenic non-protein coding RNA 1521)

Identity

Other alias-
HGNC (Hugo) LINC01521
LocusID (NCBI) 54944
Atlas_Id 66062
Location 22q12.2  [Link to chromosome band 22q12]
Location_base_pair Starts at 31346889 and ends at 31348707 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01521   26029
Cards
Entrez_Gene (NCBI)LINC01521  54944  long intergenic non-protein coding RNA 1521
Aliases
GeneCards (Weizmann)LINC01521
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:31346889-31348707 [Contig_View]  LINC01521 [Vega]
TCGA cBioPortalLINC01521
AceView (NCBI)LINC01521
Genatlas (Paris)LINC01521
WikiGenes54944
SOURCE (Princeton)LINC01521
Genetics Home Reference (NIH)LINC01521
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01521  -     chr22:31346889-31348707 +  22q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01521  -     22q12.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01521 - 22q12.2 [CytoView hg19]  LINC01521 - 22q12.2 [CytoView hg38]
Mapping of homologs : NCBILINC01521 [Mapview hg19]  LINC01521 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000471 BC004550 CR456348 DA001894
RefSeq transcript (Entrez)NM_017834
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01521
Cluster EST : UnigeneHs.648259 [ NCBI ]
CGAP (NCI)Hs.648259
Gene ExpressionLINC01521 [ NCBI-GEO ]   LINC01521 [ EBI - ARRAY_EXPRESS ]   LINC01521 [ SEEK ]   LINC01521 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01521 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)54944
GTEX Portal (Tissue expression)LINC01521
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01521
DMDM Disease mutations54944
Blocks (Seattle)LINC01521
IPIIPI00455519   IPI00016410   
Protein Interaction databases
BioGRIDLINC01521
STRING (EMBL)LINC01521
ZODIACLINC01521
Ontologies - Pathways
Huge Navigator LINC01521 [HugePedia]
snp3D : Map Gene to Disease54944
BioCentury BCIQLINC01521
ClinGenLINC01521
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54944
Clinical trialLINC01521
Miscellaneous
canSAR (ICR)LINC01521 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01521
EVEXLINC01521
GoPubMedLINC01521
iHOPLINC01521
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:23:05 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.