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LINC01522 (long intergenic non-protein coding RNA 1522)

Identity

Other alias-
HGNC (Hugo) LINC01522
LocusID (NCBI) 101927457
Atlas_Id 66063
Location 20q13.13  [Link to chromosome band 20q13]
Location_base_pair Starts at 47980093 and ends at 47990117 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01522   51224
Cards
Entrez_Gene (NCBI)LINC01522  101927457  long intergenic non-protein coding RNA 1522
Aliases
GeneCards (Weizmann)LINC01522
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:47980093-47990117 [Contig_View]  LINC01522 [Vega]
TCGA cBioPortalLINC01522
AceView (NCBI)LINC01522
Genatlas (Paris)LINC01522
WikiGenes101927457
SOURCE (Princeton)LINC01522
Genetics Home Reference (NIH)LINC01522
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01522  -     chr20:47980093-47990117 -  20q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01522  -     20q13.13   [Description]    (hg19-Feb_2009)
EnsemblLINC01522 - 20q13.13 [CytoView hg19]  LINC01522 - 20q13.13 [CytoView hg38]
Mapping of homologs : NCBILINC01522 [Mapview hg19]  LINC01522 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CB240736 DB066225 DB071041 DB088024 HY050016
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01522
Cluster EST : UnigeneHs.445823 [ NCBI ]
CGAP (NCI)Hs.445823
Gene ExpressionLINC01522 [ NCBI-GEO ]   LINC01522 [ EBI - ARRAY_EXPRESS ]   LINC01522 [ SEEK ]   LINC01522 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01522 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927457
GTEX Portal (Tissue expression)LINC01522
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01522
DMDM Disease mutations101927457
Blocks (Seattle)LINC01522
Protein Interaction databases
BioGRIDLINC01522
STRING (EMBL)LINC01522
ZODIACLINC01522
Ontologies - Pathways
Huge Navigator LINC01522 [HugePedia]
snp3D : Map Gene to Disease101927457
BioCentury BCIQLINC01522
ClinGenLINC01522
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927457
Clinical trialLINC01522
Miscellaneous
canSAR (ICR)LINC01522 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01522
EVEXLINC01522
GoPubMedLINC01522
iHOPLINC01522
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:41:44 CET 2017

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