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LINC01525 (long intergenic non-protein coding RNA 1525)

Identity

Alias_symbol (synonym)lnc-MAN1A2-1
Other alias
HGNC (Hugo) LINC01525
LocusID (NCBI) 104355292
Atlas_Id 77655
Location 1p12  [Link to chromosome band 1p12]
Location_base_pair Starts at 117295466 and ends at 117321336 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01525   51264
Cards
Entrez_Gene (NCBI)LINC01525  104355292  long intergenic non-protein coding RNA 1525
Aliaseslnc-MAN1A2-1
GeneCards (Weizmann)LINC01525
Ensembl hg19 (Hinxton)ENSG00000235202 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235202 [Gene_View]  chr1:117295466-117321336 [Contig_View]  LINC01525 [Vega]
ICGC DataPortalENSG00000235202
TCGA cBioPortalLINC01525
AceView (NCBI)LINC01525
Genatlas (Paris)LINC01525
WikiGenes104355292
SOURCE (Princeton)LINC01525
Genetics Home Reference (NIH)LINC01525
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01525  -     chr1:117295466-117321336 +  1p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01525  -     1p12   [Description]    (hg19-Feb_2009)
EnsemblLINC01525 - 1p12 [CytoView hg19]  LINC01525 - 1p12 [CytoView hg38]
Mapping of homologs : NCBILINC01525 [Mapview hg19]  LINC01525 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX109912 DB457076
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01525
Cluster EST : UnigeneHs.576446 [ NCBI ]
CGAP (NCI)Hs.576446
Alternative Splicing GalleryENSG00000235202
Gene ExpressionLINC01525 [ NCBI-GEO ]   LINC01525 [ EBI - ARRAY_EXPRESS ]   LINC01525 [ SEEK ]   LINC01525 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01525 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104355292
GTEX Portal (Tissue expression)LINC01525
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01525
DMDM Disease mutations104355292
Blocks (Seattle)LINC01525
Human Protein AtlasENSG00000235202
Protein Interaction databases
FunCoupENSG00000235202
BioGRIDLINC01525
STRING (EMBL)LINC01525
ZODIACLINC01525
Ontologies - Pathways
Huge Navigator LINC01525 [HugePedia]
snp3D : Map Gene to Disease104355292
BioCentury BCIQLINC01525
ClinGenLINC01525
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104355292
Clinical trialLINC01525
Miscellaneous
canSAR (ICR)LINC01525 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01525
EVEXLINC01525
GoPubMedLINC01525
iHOPLINC01525
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:46 CEST 2017

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