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LINC01526 (long intergenic non-protein coding RNA 1526)

Identity

Alias_symbol (synonym)Lnc-FAM46A-1
Other alias
HGNC (Hugo) LINC01526
LocusID (NCBI) 101928770
Atlas_Id 66066
Location 6q14.1  [Link to chromosome band 6q14]
Location_base_pair Starts at 81813286 and ends at 81814192 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01526   51265
Cards
Entrez_Gene (NCBI)LINC01526  101928770  long intergenic non-protein coding RNA 1526
AliasesLnc-FAM46A-1
GeneCards (Weizmann)LINC01526
Ensembl hg19 (Hinxton)ENSG00000224995 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224995 [Gene_View]  ENSG00000224995 [Sequence]  chr6:81813286-81814192 [Contig_View]  LINC01526 [Vega]
ICGC DataPortalENSG00000224995
TCGA cBioPortalLINC01526
AceView (NCBI)LINC01526
Genatlas (Paris)LINC01526
WikiGenes101928770
SOURCE (Princeton)LINC01526
Genetics Home Reference (NIH)LINC01526
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01526  -     chr6:81813286-81814192 -  6q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01526  -     6q14.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01526 - 6q14.1 [CytoView hg19]  LINC01526 - 6q14.1 [CytoView hg38]
Mapping of homologs : NCBILINC01526 [Mapview hg19]  LINC01526 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038196 BC038576
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01526
Cluster EST : UnigeneHs.586239 [ NCBI ]
CGAP (NCI)Hs.586239
Alternative Splicing GalleryENSG00000224995
Gene ExpressionLINC01526 [ NCBI-GEO ]   LINC01526 [ EBI - ARRAY_EXPRESS ]   LINC01526 [ SEEK ]   LINC01526 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01526 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928770
GTEX Portal (Tissue expression)LINC01526
Human Protein AtlasENSG00000224995-LINC01526 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01526
DMDM Disease mutations101928770
Blocks (Seattle)LINC01526
Human Protein Atlas [tissue]ENSG00000224995-LINC01526 [tissue]
Protein Interaction databases
FunCoupENSG00000224995
BioGRIDLINC01526
STRING (EMBL)LINC01526
ZODIACLINC01526
Ontologies - Pathways
Huge Navigator LINC01526 [HugePedia]
snp3D : Map Gene to Disease101928770
BioCentury BCIQLINC01526
ClinGenLINC01526
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928770
Clinical trialLINC01526
Miscellaneous
canSAR (ICR)LINC01526 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01526
EVEXLINC01526
GoPubMedLINC01526
iHOPLINC01526
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:55:16 CEST 2018

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