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LINC01527 (long intergenic non-protein coding RNA 1527)

Identity

Alias_symbol (synonym)lnc-SPRR2D-1
Other alias
HGNC (Hugo) LINC01527
LocusID (NCBI) 101927988
Atlas_Id 66067
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 152902518 and ends at 152921686 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01527   51266
Cards
Entrez_Gene (NCBI)LINC01527  101927988  long intergenic non-protein coding RNA 1527
Aliaseslnc-SPRR2D-1
GeneCards (Weizmann)LINC01527
Ensembl hg19 (Hinxton)ENSG00000224308 [Gene_View]  chr1:152902518-152921686 [Contig_View]  LINC01527 [Vega]
Ensembl hg38 (Hinxton)ENSG00000224308 [Gene_View]  chr1:152902518-152921686 [Contig_View]  LINC01527 [Vega]
ICGC DataPortalENSG00000224308
TCGA cBioPortalLINC01527
AceView (NCBI)LINC01527
Genatlas (Paris)LINC01527
WikiGenes101927988
SOURCE (Princeton)LINC01527
Genetics Home Reference (NIH)LINC01527
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01527  -     chr1:152902518-152921686 -  1q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01527  -     1q21.3   [Description]    (hg38-Dec_2013)
EnsemblLINC01527 - 1q21.3 [CytoView hg19]  LINC01527 - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBILINC01527 [Mapview hg19]  LINC01527 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042056 HG492775
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)LINC01527
Cluster EST : UnigeneHs.87271 [ NCBI ]
CGAP (NCI)Hs.87271
Alternative Splicing GalleryENSG00000224308
Gene ExpressionLINC01527 [ NCBI-GEO ]   LINC01527 [ EBI - ARRAY_EXPRESS ]   LINC01527 [ SEEK ]   LINC01527 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01527 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927988
GTEX Portal (Tissue expression)LINC01527
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01527
DMDM Disease mutations101927988
Blocks (Seattle)LINC01527
Human Protein AtlasENSG00000224308
Protein Interaction databases
FunCoupENSG00000224308
BioGRIDLINC01527
STRING (EMBL)LINC01527
ZODIACLINC01527
Ontologies - Pathways
Huge Navigator LINC01527 [HugePedia]
snp3D : Map Gene to Disease101927988
BioCentury BCIQLINC01527
ClinGenLINC01527
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927988
Clinical trialLINC01527
Miscellaneous
canSAR (ICR)LINC01527 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01527
EVEXLINC01527
GoPubMedLINC01527
iHOPLINC01527
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:14:11 CET 2017

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