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LINC01529 (long intergenic non-protein coding RNA 1529)

Identity

Other alias-
HGNC (Hugo) LINC01529
LocusID (NCBI) 644050
Atlas_Id 66068
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 35788876 and ends at 35797909 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01529   51268
Cards
Entrez_Gene (NCBI)LINC01529  644050  long intergenic non-protein coding RNA 1529
Aliases
GeneCards (Weizmann)LINC01529
Ensembl hg19 (Hinxton)ENSG00000225872 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225872 [Gene_View]  chr19:35788876-35797909 [Contig_View]  LINC01529 [Vega]
ICGC DataPortalENSG00000225872
TCGA cBioPortalLINC01529
AceView (NCBI)LINC01529
Genatlas (Paris)LINC01529
WikiGenes644050
SOURCE (Princeton)LINC01529
Genetics Home Reference (NIH)LINC01529
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01529  -     chr19:35788876-35797909 -  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01529  -     19q13.12   [Description]    (hg19-Feb_2009)
EnsemblLINC01529 - 19q13.12 [CytoView hg19]  LINC01529 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBILINC01529 [Mapview hg19]  LINC01529 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055260 DA464500
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01529
Cluster EST : UnigeneHs.651888 [ NCBI ]
CGAP (NCI)Hs.651888
Alternative Splicing GalleryENSG00000225872
Gene ExpressionLINC01529 [ NCBI-GEO ]   LINC01529 [ EBI - ARRAY_EXPRESS ]   LINC01529 [ SEEK ]   LINC01529 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01529 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644050
GTEX Portal (Tissue expression)LINC01529
Human Protein AtlasENSG00000225872-LINC01529 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01529
DMDM Disease mutations644050
Blocks (Seattle)LINC01529
Human Protein Atlas [tissue]ENSG00000225872-LINC01529 [tissue]
Protein Interaction databases
FunCoupENSG00000225872
BioGRIDLINC01529
STRING (EMBL)LINC01529
ZODIACLINC01529
Ontologies - Pathways
Huge Navigator LINC01529 [HugePedia]
snp3D : Map Gene to Disease644050
BioCentury BCIQLINC01529
ClinGenLINC01529
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644050
Clinical trialLINC01529
Miscellaneous
canSAR (ICR)LINC01529 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01529
EVEXLINC01529
GoPubMedLINC01529
iHOPLINC01529
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:38:54 CET 2017

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