Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01532 (long intergenic non-protein coding RNA 1532)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01532
LocusID (NCBI) 100505835
Atlas_Id 66071
Location 19q12  [Link to chromosome band 19q12]
Location_base_pair Starts at 29002555 and ends at 29013955 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01532   51272
Cards
Entrez_Gene (NCBI)LINC01532    long intergenic non-protein coding RNA 1532
Aliases
GeneCards (Weizmann)LINC01532
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr19:29002555-29013955 [Contig_View]  LINC01532 [Vega]
TCGA cBioPortalLINC01532
AceView (NCBI)LINC01532
Genatlas (Paris)LINC01532
SOURCE (Princeton)LINC01532
Genetics Home Reference (NIH)LINC01532
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01532  -     chr19:29002555-29013955 +  19q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01532  -     19q12   [Description]    (hg19-Feb_2009)
GoldenPathLINC01532 - 19q12 [CytoView hg19]  LINC01532 - 19q12 [CytoView hg38]
genome Data Viewer NCBILINC01532 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK055100 BC039394
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01532
Gene ExpressionLINC01532 [ NCBI-GEO ]   LINC01532 [ EBI - ARRAY_EXPRESS ]   LINC01532 [ SEEK ]   LINC01532 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01532 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01532 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100505835
GTEX Portal (Tissue expression)LINC01532
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01532
Blocks (Seattle)LINC01532
Protein Interaction databases
BioGRIDLINC01532
STRING (EMBL)LINC01532
ZODIACLINC01532
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01532
EVEXLINC01532
GoPubMedLINC01532
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:02:37 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.