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LINC01533 (long intergenic non-protein coding RNA 1533)

Identity

Other aliasCTC-360P9.3
HGNC (Hugo) LINC01533
LocusID (NCBI) 100996665
Atlas_Id 66072
Location 19q13.11  [Link to chromosome band 19q13]
Location_base_pair Starts at 32025862 and ends at 32039853 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01533   51274
Cards
Entrez_Gene (NCBI)LINC01533  100996665  long intergenic non-protein coding RNA 1533
AliasesCTC-360P9.3
GeneCards (Weizmann)LINC01533
Ensembl hg19 (Hinxton)ENSG00000267779 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267779 [Gene_View]  chr19:32025862-32039853 [Contig_View]  LINC01533 [Vega]
ICGC DataPortalENSG00000267779
TCGA cBioPortalLINC01533
AceView (NCBI)LINC01533
Genatlas (Paris)LINC01533
WikiGenes100996665
SOURCE (Princeton)LINC01533
Genetics Home Reference (NIH)LINC01533
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01533  -     chr19:32025862-32039853 +  19q13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01533  -     19q13.11   [Description]    (hg19-Feb_2009)
EnsemblLINC01533 - 19q13.11 [CytoView hg19]  LINC01533 - 19q13.11 [CytoView hg38]
Mapping of homologs : NCBILINC01533 [Mapview hg19]  LINC01533 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA824408 AK097493 BF511702 BX116841
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01533
Cluster EST : UnigeneHs.443685 [ NCBI ]
CGAP (NCI)Hs.443685
Alternative Splicing GalleryENSG00000267779
Gene ExpressionLINC01533 [ NCBI-GEO ]   LINC01533 [ EBI - ARRAY_EXPRESS ]   LINC01533 [ SEEK ]   LINC01533 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01533 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996665
GTEX Portal (Tissue expression)LINC01533
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01533
DMDM Disease mutations100996665
Blocks (Seattle)LINC01533
Human Protein AtlasENSG00000267779
Protein Interaction databases
FunCoupENSG00000267779
BioGRIDLINC01533
STRING (EMBL)LINC01533
ZODIACLINC01533
Ontologies - Pathways
Huge Navigator LINC01533 [HugePedia]
snp3D : Map Gene to Disease100996665
BioCentury BCIQLINC01533
ClinGenLINC01533
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996665
Clinical trialLINC01533
Miscellaneous
canSAR (ICR)LINC01533 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01533
EVEXLINC01533
GoPubMedLINC01533
iHOPLINC01533
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:23:07 CEST 2017

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