Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01537 (long intergenic non-protein coding RNA 1537)


Alias (NCBI)-
HGNC (Hugo) LINC01537
HGNC Alias symbRP11-169D4.1-001
LocusID (NCBI) 101928555
Atlas_Id 66075
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 72570656 and ends at 72573222 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01537   51301
Entrez_Gene (NCBI)LINC01537    long intergenic non-protein coding RNA 1537
GeneCards (Weizmann)LINC01537
Ensembl hg19 (Hinxton)ENSG00000227467 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227467 [Gene_View]  ENSG00000227467 [Sequence]  chr11:72570656-72573222 [Contig_View]  LINC01537 [Vega]
ICGC DataPortalENSG00000227467
TCGA cBioPortalLINC01537
AceView (NCBI)LINC01537
Genatlas (Paris)LINC01537
SOURCE (Princeton)LINC01537
Genetics Home Reference (NIH)LINC01537
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01537  -     chr11:72570656-72573222 +  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01537  -     11q13.4   [Description]    (hg19-Feb_2009)
GoldenPathLINC01537 - 11q13.4 [CytoView hg19]  LINC01537 - 11q13.4 [CytoView hg38]
genome Data Viewer NCBILINC01537 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL832797
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01537
Alternative Splicing GalleryENSG00000227467
Gene ExpressionLINC01537 [ NCBI-GEO ]   LINC01537 [ EBI - ARRAY_EXPRESS ]   LINC01537 [ SEEK ]   LINC01537 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01537 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01537 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928555
GTEX Portal (Tissue expression)LINC01537
Human Protein AtlasENSG00000227467-LINC01537 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01537
Blocks (Seattle)LINC01537
Human Protein Atlas [tissue]ENSG00000227467-LINC01537 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:02:38 CET 2020

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