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LINC01537 (long intergenic non-protein coding RNA 1537)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01537
HGNC Alias symbRP11-169D4.1-001
LocusID (NCBI) 101928555
Atlas_Id 66075
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 72570656 and ends at 72573222 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01537   51301
Cards
Entrez_Gene (NCBI)LINC01537    long intergenic non-protein coding RNA 1537
Aliases
GeneCards (Weizmann)LINC01537
Ensembl hg19 (Hinxton)ENSG00000227467 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227467 [Gene_View]  ENSG00000227467 [Sequence]  chr11:72570656-72573222 [Contig_View]  LINC01537 [Vega]
ICGC DataPortalENSG00000227467
TCGA cBioPortalLINC01537
AceView (NCBI)LINC01537
Genatlas (Paris)LINC01537
SOURCE (Princeton)LINC01537
Genetics Home Reference (NIH)LINC01537
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01537  -     chr11:72570656-72573222 +  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01537  -     11q13.4   [Description]    (hg19-Feb_2009)
GoldenPathLINC01537 - 11q13.4 [CytoView hg19]  LINC01537 - 11q13.4 [CytoView hg38]
ImmunoBaseENSG00000227467
genome Data Viewer NCBILINC01537 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL832797
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01537
Alternative Splicing GalleryENSG00000227467
Gene ExpressionLINC01537 [ NCBI-GEO ]   LINC01537 [ EBI - ARRAY_EXPRESS ]   LINC01537 [ SEEK ]   LINC01537 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01537 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01537 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928555
GTEX Portal (Tissue expression)LINC01537
Human Protein AtlasENSG00000227467-LINC01537 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01537
Blocks (Seattle)LINC01537
Human Protein Atlas [tissue]ENSG00000227467-LINC01537 [tissue]
Protein Interaction databases
BioGRIDLINC01537
STRING (EMBL)LINC01537
ZODIACLINC01537
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01537
EVEXLINC01537
GoPubMedLINC01537
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Sat Dec 5 17:02:38 CET 2020

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