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LINC01543 (long intergenic non-protein coding RNA 1543)

Identity

Alias_symbol (synonym)TCONS_00026302
Other alias-
HGNC (Hugo) LINC01543
LocusID (NCBI) 100506787
Atlas_Id 66080
Location 18q11.2  [Link to chromosome band 18q11]
Location_base_pair Starts at 26422995 and ends at 26438044 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01543   51310
Cards
Entrez_Gene (NCBI)LINC01543  100506787  long intergenic non-protein coding RNA 1543
Aliases
GeneCards (Weizmann)LINC01543
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr18:26422995-26438044 [Contig_View]  LINC01543 [Vega]
TCGA cBioPortalLINC01543
AceView (NCBI)LINC01543
Genatlas (Paris)LINC01543
WikiGenes100506787
SOURCE (Princeton)LINC01543
Genetics Home Reference (NIH)LINC01543
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01543  -     chr18:26422995-26438044 +  18q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01543  -     18q11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01543 - 18q11.2 [CytoView hg19]  LINC01543 - 18q11.2 [CytoView hg38]
Mapping of homologs : NCBILINC01543 [Mapview hg19]  LINC01543 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI792351 HY185322
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01543
Cluster EST : UnigeneHs.734746 [ NCBI ]
CGAP (NCI)Hs.734746
Gene ExpressionLINC01543 [ NCBI-GEO ]   LINC01543 [ EBI - ARRAY_EXPRESS ]   LINC01543 [ SEEK ]   LINC01543 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01543 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506787
GTEX Portal (Tissue expression)LINC01543
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01543
DMDM Disease mutations100506787
Blocks (Seattle)LINC01543
Protein Interaction databases
BioGRIDLINC01543
STRING (EMBL)LINC01543
ZODIACLINC01543
Ontologies - Pathways
Huge Navigator LINC01543 [HugePedia]
snp3D : Map Gene to Disease100506787
BioCentury BCIQLINC01543
ClinGenLINC01543
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506787
Clinical trialLINC01543
Miscellaneous
canSAR (ICR)LINC01543 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01543
EVEXLINC01543
GoPubMedLINC01543
iHOPLINC01543
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:59:22 CEST 2017

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