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LINC01566 (long intergenic non-protein coding RNA 1566)

Identity

Other alias-
HGNC (Hugo) LINC01566
LocusID (NCBI) 283914
Atlas_Id 66101
Location 16p11.1  [Link to chromosome band 16p11]
Location_base_pair Starts at 35363531 and ends at 35390584 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01566   27555
Cards
Entrez_Gene (NCBI)LINC01566  283914  long intergenic non-protein coding RNA 1566
Aliases
GeneCards (Weizmann)LINC01566
Ensembl hg19 (Hinxton)ENSG00000259841 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259841 [Gene_View]  chr16:35363531-35390584 [Contig_View]  LINC01566 [Vega]
ICGC DataPortalENSG00000259841
TCGA cBioPortalLINC01566
AceView (NCBI)LINC01566
Genatlas (Paris)LINC01566
WikiGenes283914
SOURCE (Princeton)LINC01566
Genetics Home Reference (NIH)LINC01566
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01566  -     chr16:35363531-35390584 +  16p11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01566  -     16p11.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01566 - 16p11.1 [CytoView hg19]  LINC01566 - 16p11.1 [CytoView hg38]
Mapping of homologs : NCBILINC01566 [Mapview hg19]  LINC01566 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038774 BC045579
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01566
Cluster EST : UnigeneHs.385772 [ NCBI ]
CGAP (NCI)Hs.385772
Alternative Splicing GalleryENSG00000259841
Gene ExpressionLINC01566 [ NCBI-GEO ]   LINC01566 [ EBI - ARRAY_EXPRESS ]   LINC01566 [ SEEK ]   LINC01566 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01566 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283914
GTEX Portal (Tissue expression)LINC01566
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01566
DMDM Disease mutations283914
Blocks (Seattle)LINC01566
Human Protein AtlasENSG00000259841
Protein Interaction databases
FunCoupENSG00000259841
BioGRIDLINC01566
STRING (EMBL)LINC01566
ZODIACLINC01566
Ontologies - Pathways
Huge Navigator LINC01566 [HugePedia]
snp3D : Map Gene to Disease283914
BioCentury BCIQLINC01566
ClinGenLINC01566
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283914
Chemical/Pharm GKB GenePA166123700
Clinical trialLINC01566
Miscellaneous
canSAR (ICR)LINC01566 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01566
EVEXLINC01566
GoPubMedLINC01566
iHOPLINC01566
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:23:14 CEST 2017

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