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LINC01570 (long intergenic non-protein coding RNA 1570)

Identity

Other alias-
HGNC (Hugo) LINC01570
LocusID (NCBI) 101926950
Atlas_Id 66105
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 5601169 and ends at 5616250 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01570   51382
Cards
Entrez_Gene (NCBI)LINC01570  101926950  long intergenic non-protein coding RNA 1570
Aliases
GeneCards (Weizmann)LINC01570
Ensembl hg19 (Hinxton)ENSG00000260338 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260338 [Gene_View]  chr16:5601169-5616250 [Contig_View]  LINC01570 [Vega]
ICGC DataPortalENSG00000260338
TCGA cBioPortalLINC01570
AceView (NCBI)LINC01570
Genatlas (Paris)LINC01570
WikiGenes101926950
SOURCE (Princeton)LINC01570
Genetics Home Reference (NIH)LINC01570
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01570  -     chr16:5601169-5616250 -  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01570  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01570 - 16p13.3 [CytoView hg19]  LINC01570 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBILINC01570 [Mapview hg19]  LINC01570 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB449025 HY009375
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01570
Cluster EST : UnigeneHs.613285 [ NCBI ]
CGAP (NCI)Hs.613285
Alternative Splicing GalleryENSG00000260338
Gene ExpressionLINC01570 [ NCBI-GEO ]   LINC01570 [ EBI - ARRAY_EXPRESS ]   LINC01570 [ SEEK ]   LINC01570 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01570 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101926950
GTEX Portal (Tissue expression)LINC01570
Human Protein AtlasENSG00000260338-LINC01570 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01570
DMDM Disease mutations101926950
Blocks (Seattle)LINC01570
Human Protein Atlas [tissue]ENSG00000260338-LINC01570 [tissue]
Protein Interaction databases
FunCoupENSG00000260338
BioGRIDLINC01570
STRING (EMBL)LINC01570
ZODIACLINC01570
Ontologies - Pathways
Huge Navigator LINC01570 [HugePedia]
snp3D : Map Gene to Disease101926950
BioCentury BCIQLINC01570
ClinGenLINC01570
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101926950
Clinical trialLINC01570
Miscellaneous
canSAR (ICR)LINC01570 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01570
EVEXLINC01570
GoPubMedLINC01570
iHOPLINC01570
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:56:41 CET 2017

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