Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01571 (long intergenic non-protein coding RNA 1571)

Identity

Alias_symbol (synonym)TCONS_00024399
Other alias-
HGNC (Hugo) LINC01571
LocusID (NCBI) 101927364
Atlas_Id 66106
Location 16q12.1  [Link to chromosome band 16q12]
Location_base_pair Starts at 51796430 and ends at 51806557 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01571   51384
Cards
Entrez_Gene (NCBI)LINC01571  101927364  long intergenic non-protein coding RNA 1571
Aliases
GeneCards (Weizmann)LINC01571
Ensembl hg19 (Hinxton)ENSG00000260057 [Gene_View]  chr16:51796430-51806557 [Contig_View]  LINC01571 [Vega]
Ensembl hg38 (Hinxton)ENSG00000260057 [Gene_View]  chr16:51796430-51806557 [Contig_View]  LINC01571 [Vega]
ICGC DataPortalENSG00000260057
TCGA cBioPortalLINC01571
AceView (NCBI)LINC01571
Genatlas (Paris)LINC01571
WikiGenes101927364
SOURCE (Princeton)LINC01571
Genetics Home Reference (NIH)LINC01571
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01571  -     chr16:51796430-51806557 +  16q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01571  -     16q12.1   [Description]    (hg38-Dec_2013)
EnsemblLINC01571 - 16q12.1 [CytoView hg19]  LINC01571 - 16q12.1 [CytoView hg38]
Mapping of homologs : NCBILINC01571 [Mapview hg19]  LINC01571 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI050873 HG508068 HG508069
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)LINC01571
Cluster EST : UnigeneHs.133120 [ NCBI ]
CGAP (NCI)Hs.133120
Alternative Splicing GalleryENSG00000260057
Gene ExpressionLINC01571 [ NCBI-GEO ]   LINC01571 [ EBI - ARRAY_EXPRESS ]   LINC01571 [ SEEK ]   LINC01571 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01571 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927364
GTEX Portal (Tissue expression)LINC01571
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01571
DMDM Disease mutations101927364
Blocks (Seattle)LINC01571
Human Protein AtlasENSG00000260057
Protein Interaction databases
FunCoupENSG00000260057
BioGRIDLINC01571
STRING (EMBL)LINC01571
ZODIACLINC01571
Ontologies - Pathways
Huge Navigator LINC01571 [HugePedia]
snp3D : Map Gene to Disease101927364
BioCentury BCIQLINC01571
ClinGenLINC01571
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927364
Clinical trialLINC01571
Miscellaneous
canSAR (ICR)LINC01571 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01571
EVEXLINC01571
GoPubMedLINC01571
iHOPLINC01571
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:14:19 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.