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LINC01578 (long intergenic non-protein coding RNA 1578)

Identity

Other alias-
HGNC (Hugo) LINC01578
LocusID (NCBI) 100507217
Atlas_Id 77253
Location 15q26.1  [Link to chromosome band 15q26]
Location_base_pair Starts at 93426073 and ends at 93441977 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01578   48626
Cards
Entrez_Gene (NCBI)LINC01578  100507217  long intergenic non-protein coding RNA 1578
Aliases
GeneCards (Weizmann)LINC01578
Ensembl hg19 (Hinxton) [Gene_View]  chr15:93426073-93441977 [Contig_View]  LINC01578 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:93426073-93441977 [Contig_View]  LINC01578 [Vega]
TCGA cBioPortalLINC01578
AceView (NCBI)LINC01578
Genatlas (Paris)LINC01578
WikiGenes100507217
SOURCE (Princeton)LINC01578
Genetics Home Reference (NIH)LINC01578
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01578  -     chr15:93426073-93441977 +  15q26.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01578  -     15q26.1   [Description]    (hg38-Dec_2013)
EnsemblLINC01578 - 15q26.1 [CytoView hg19]  LINC01578 - 15q26.1 [CytoView hg38]
Mapping of homologs : NCBILINC01578 [Mapview hg19]  LINC01578 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA083786 AW246969 BQ188346 BQ890654 BU848955
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929399
Consensus coding sequences : CCDS (NCBI)LINC01578
Cluster EST : UnigeneHs.622504 [ NCBI ]
CGAP (NCI)Hs.622504
Gene ExpressionLINC01578 [ NCBI-GEO ]   LINC01578 [ EBI - ARRAY_EXPRESS ]   LINC01578 [ SEEK ]   LINC01578 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01578 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507217
GTEX Portal (Tissue expression)LINC01578
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01578
DMDM Disease mutations100507217
Blocks (Seattle)LINC01578
Protein Interaction databases
BioGRIDLINC01578
STRING (EMBL)LINC01578
ZODIACLINC01578
Ontologies - Pathways
Huge Navigator LINC01578 [HugePedia]
snp3D : Map Gene to Disease100507217
BioCentury BCIQLINC01578
ClinGenLINC01578
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507217
Clinical trialLINC01578
Miscellaneous
canSAR (ICR)LINC01578 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01578
EVEXLINC01578
GoPubMedLINC01578
iHOPLINC01578
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:14:19 CET 2017

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