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LINC01589 (long intergenic non-protein coding RNA 1589)

Identity

Alias_symbol (synonym)CTA-941F9.9
TCONS_00029353
Other alias
HGNC (Hugo) LINC01589
LocusID (NCBI) 100506737
Atlas_Id 77409
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 46000312 and ends at 46001527 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01589   51520
Cards
Entrez_Gene (NCBI)LINC01589  100506737  long intergenic non-protein coding RNA 1589
AliasesTCONS_00029353
GeneCards (Weizmann)LINC01589
Ensembl hg19 (Hinxton) [Gene_View]  chr22:46000312-46001527 [Contig_View]  LINC01589 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:46000312-46001527 [Contig_View]  LINC01589 [Vega]
TCGA cBioPortalLINC01589
AceView (NCBI)LINC01589
Genatlas (Paris)LINC01589
WikiGenes100506737
SOURCE (Princeton)LINC01589
Genetics Home Reference (NIH)LINC01589
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01589  -     chr22:46000312-46001527 -  22q13.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01589  -     22q13.31   [Description]    (hg38-Dec_2013)
EnsemblLINC01589 - 22q13.31 [CytoView hg19]  LINC01589 - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBILINC01589 [Mapview hg19]  LINC01589 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC045163 BQ188486 HG512356
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)LINC01589
Cluster EST : UnigeneHs.517692 [ NCBI ]
CGAP (NCI)Hs.517692
Gene ExpressionLINC01589 [ NCBI-GEO ]   LINC01589 [ EBI - ARRAY_EXPRESS ]   LINC01589 [ SEEK ]   LINC01589 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01589 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506737
GTEX Portal (Tissue expression)LINC01589
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01589
DMDM Disease mutations100506737
Blocks (Seattle)LINC01589
Protein Interaction databases
BioGRIDLINC01589
STRING (EMBL)LINC01589
ZODIACLINC01589
Ontologies - Pathways
Huge Navigator LINC01589 [HugePedia]
snp3D : Map Gene to Disease100506737
BioCentury BCIQLINC01589
ClinGenLINC01589
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506737
Clinical trialLINC01589
Miscellaneous
canSAR (ICR)LINC01589 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01589
EVEXLINC01589
GoPubMedLINC01589
iHOPLINC01589
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:14:22 CET 2017

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