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LINC01593 (long intergenic non-protein coding RNA 1593)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01593
HGNC Alias symbTCONS_00003364
LocusID (NCBI) 107178918
Atlas_Id 78221
Location 2q12.3  [Link to chromosome band 2q12]
Location_base_pair Starts at 108049200 and ends at 108052755 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01593   51583
Cards
Entrez_Gene (NCBI)LINC01593    long intergenic non-protein coding RNA 1593
Aliases
GeneCards (Weizmann)LINC01593
Ensembl hg19 (Hinxton)ENSG00000231221 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231221 [Gene_View]  ENSG00000231221 [Sequence]  chr2:108049200-108052755 [Contig_View]  LINC01593 [Vega]
ICGC DataPortalENSG00000231221
TCGA cBioPortalLINC01593
AceView (NCBI)LINC01593
Genatlas (Paris)LINC01593
SOURCE (Princeton)LINC01593
Genetics Home Reference (NIH)LINC01593
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01593  -     chr2:108049200-108052755 -  2q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01593  -     2q12.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01593 - 2q12.3 [CytoView hg19]  LINC01593 - 2q12.3 [CytoView hg38]
ImmunoBaseENSG00000231221
Genome Data Viewer NCBILINC01593 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01593
Gene ExpressionLINC01593 [ NCBI-GEO ]   LINC01593 [ EBI - ARRAY_EXPRESS ]   LINC01593 [ SEEK ]   LINC01593 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01593 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01593 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)107178918
GTEX Portal (Tissue expression)LINC01593
Human Protein AtlasENSG00000231221-LINC01593 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01593
Human Protein Atlas [tissue]ENSG00000231221-LINC01593 [tissue]
Protein Interaction databases
BioGRIDLINC01593
STRING (EMBL)LINC01593
ZODIACLINC01593
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01593
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:58:14 CEST 2021

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