Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01594 (long intergenic non-protein coding RNA 1594)


Alias (NCBI)TCONS_l2_00015893
HGNC (Hugo) LINC01594
HGNC Alias symbTCONS_l2_00015893
LocusID (NCBI) 102724774
Atlas_Id 76999
Location 2q12.3  [Link to chromosome band 2q12]
Location_base_pair Starts at 108167748 and ends at 108217841 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01594   51584
Entrez_Gene (NCBI)LINC01594    long intergenic non-protein coding RNA 1594
GeneCards (Weizmann)LINC01594
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr2:108167748-108217841 [Contig_View]  LINC01594 [Vega]
TCGA cBioPortalLINC01594
AceView (NCBI)LINC01594
Genatlas (Paris)LINC01594
SOURCE (Princeton)LINC01594
Genetics Home Reference (NIH)LINC01594
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01594  -     chr2:108167748-108217841 -  2q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01594  -     2q12.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01594 - 2q12.3 [CytoView hg19]  LINC01594 - 2q12.3 [CytoView hg38]
Genome Data Viewer NCBILINC01594 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)CR748429
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01594
Gene ExpressionLINC01594 [ NCBI-GEO ]   LINC01594 [ EBI - ARRAY_EXPRESS ]   LINC01594 [ SEEK ]   LINC01594 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01594 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01594 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102724774
GTEX Portal (Tissue expression)LINC01594
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01594
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:58:14 CEST 2021

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