Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01597 (long intergenic non-protein coding RNA 1597)

Identity

Other alias-
HGNC (Hugo) LINC01597
LocusID (NCBI) 400841
Atlas_Id 76857
Location 20q11.21  [Link to chromosome band 20q11]
Location_base_pair Starts at 29513582 and ends at 29521213 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01597   51594
Cards
Entrez_Gene (NCBI)LINC01597  400841  long intergenic non-protein coding RNA 1597
Aliases
GeneCards (Weizmann)LINC01597
Ensembl hg19 (Hinxton) [Gene_View]  chr20:29513582-29521213 [Contig_View]  LINC01597 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:29513582-29521213 [Contig_View]  LINC01597 [Vega]
TCGA cBioPortalLINC01597
AceView (NCBI)LINC01597
Genatlas (Paris)LINC01597
WikiGenes400841
SOURCE (Princeton)LINC01597
Genetics Home Reference (NIH)LINC01597
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01597  -     chr20:29513582-29521213 -  20q11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01597  -     20q11.21   [Description]    (hg38-Dec_2013)
EnsemblLINC01597 - 20q11.21 [CytoView hg19]  LINC01597 - 20q11.21 [CytoView hg38]
Mapping of homologs : NCBILINC01597 [Mapview hg19]  LINC01597 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127732
RefSeq transcript (Entrez)NM_207470
RefSeq genomic (Entrez)AC_000152 NC_000020 NC_018931 NT_025215 NW_001838663 NW_004078101
Consensus coding sequences : CCDS (NCBI)LINC01597
Cluster EST : UnigeneHs.516959 [ NCBI ]
CGAP (NCI)Hs.516959
Gene ExpressionLINC01597 [ NCBI-GEO ]   LINC01597 [ EBI - ARRAY_EXPRESS ]   LINC01597 [ SEEK ]   LINC01597 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01597 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400841
GTEX Portal (Tissue expression)LINC01597
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01597
DMDM Disease mutations400841
Blocks (Seattle)LINC01597
HPRD16992
IPIIPI00410539   
Protein Interaction databases
BioGRIDLINC01597
STRING (EMBL)LINC01597
ZODIACLINC01597
Ontologies - Pathways
Huge Navigator LINC01597 [HugePedia]
snp3D : Map Gene to Disease400841
BioCentury BCIQLINC01597
ClinGenLINC01597
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400841
Clinical trialLINC01597
Miscellaneous
canSAR (ICR)LINC01597 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01597
EVEXLINC01597
GoPubMedLINC01597
iHOPLINC01597
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:14:23 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.