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LINC01607 (long intergenic non-protein coding RNA 1607)

Identity

Other alias-
HGNC (Hugo) LINC01607
LocusID (NCBI) 101927067
Atlas_Id 67047
Location 8q21.13  [Link to chromosome band 8q21]
Location_base_pair Starts at 79768142 and ends at 79802842 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01607   51660
Cards
Entrez_Gene (NCBI)LINC01607  101927067  long intergenic non-protein coding RNA 1607
Aliases
GeneCards (Weizmann)LINC01607
Ensembl hg19 (Hinxton)ENSG00000272138 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000272138 [Gene_View]  chr8:79768142-79802842 [Contig_View]  LINC01607 [Vega]
ICGC DataPortalENSG00000272138
TCGA cBioPortalLINC01607
AceView (NCBI)LINC01607
Genatlas (Paris)LINC01607
WikiGenes101927067
SOURCE (Princeton)LINC01607
Genetics Home Reference (NIH)LINC01607
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01607  -     chr8:79768142-79802842 +  8q21.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01607  -     8q21.13   [Description]    (hg19-Feb_2009)
EnsemblLINC01607 - 8q21.13 [CytoView hg19]  LINC01607 - 8q21.13 [CytoView hg38]
Mapping of homologs : NCBILINC01607 [Mapview hg19]  LINC01607 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI214797 AI793314 AI801879
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01607
Cluster EST : UnigeneHs.144030 [ NCBI ]
CGAP (NCI)Hs.144030
Alternative Splicing GalleryENSG00000272138
Gene ExpressionLINC01607 [ NCBI-GEO ]   LINC01607 [ EBI - ARRAY_EXPRESS ]   LINC01607 [ SEEK ]   LINC01607 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01607 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927067
GTEX Portal (Tissue expression)LINC01607
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01607
DMDM Disease mutations101927067
Blocks (Seattle)LINC01607
Human Protein AtlasENSG00000272138
Protein Interaction databases
FunCoupENSG00000272138
BioGRIDLINC01607
STRING (EMBL)LINC01607
ZODIACLINC01607
Ontologies - Pathways
Huge Navigator LINC01607 [HugePedia]
snp3D : Map Gene to Disease101927067
BioCentury BCIQLINC01607
ClinGenLINC01607
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927067
Clinical trialLINC01607
Miscellaneous
canSAR (ICR)LINC01607 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01607
EVEXLINC01607
GoPubMedLINC01607
iHOPLINC01607
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:59:34 CEST 2017

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