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LINC01609 (long intergenic non-protein coding RNA 1609)

Identity

Other alias-
HGNC (Hugo) LINC01609
LocusID (NCBI) 101927487
Atlas_Id 67149
Location 8q23.3  [Link to chromosome band 8q23]
Location_base_pair Starts at 112111190 and ends at 112248432 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01609   51663
Cards
Entrez_Gene (NCBI)LINC01609  101927487  long intergenic non-protein coding RNA 1609
Aliases
GeneCards (Weizmann)LINC01609
Ensembl hg19 (Hinxton)ENSG00000253103 [Gene_View]  chr8:112111190-112248432 [Contig_View]  LINC01609 [Vega]
Ensembl hg38 (Hinxton)ENSG00000253103 [Gene_View]  chr8:112111190-112248432 [Contig_View]  LINC01609 [Vega]
ICGC DataPortalENSG00000253103
TCGA cBioPortalLINC01609
AceView (NCBI)LINC01609
Genatlas (Paris)LINC01609
WikiGenes101927487
SOURCE (Princeton)LINC01609
Genetics Home Reference (NIH)LINC01609
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01609  -     chr8:112111190-112248432 -  8q23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01609  -     8q23.3   [Description]    (hg38-Dec_2013)
EnsemblLINC01609 - 8q23.3 [CytoView hg19]  LINC01609 - 8q23.3 [CytoView hg38]
Mapping of homologs : NCBILINC01609 [Mapview hg19]  LINC01609 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BI459905 DB448904 HG501582
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)LINC01609
Cluster EST : UnigeneHs.641957 [ NCBI ]
CGAP (NCI)Hs.641957
Alternative Splicing GalleryENSG00000253103
Gene ExpressionLINC01609 [ NCBI-GEO ]   LINC01609 [ EBI - ARRAY_EXPRESS ]   LINC01609 [ SEEK ]   LINC01609 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01609 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927487
GTEX Portal (Tissue expression)LINC01609
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01609
DMDM Disease mutations101927487
Blocks (Seattle)LINC01609
Human Protein AtlasENSG00000253103
Protein Interaction databases
FunCoupENSG00000253103
BioGRIDLINC01609
STRING (EMBL)LINC01609
ZODIACLINC01609
Ontologies - Pathways
Huge Navigator LINC01609 [HugePedia]
snp3D : Map Gene to Disease101927487
BioCentury BCIQLINC01609
ClinGenLINC01609
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927487
Clinical trialLINC01609
Miscellaneous
canSAR (ICR)LINC01609 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01609
EVEXLINC01609
GoPubMedLINC01609
iHOPLINC01609
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:14:26 CET 2017

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