Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01611 (long intergenic non-protein coding RNA 1611)


Alias (NCBI)TCONS_l2_00025430
HGNC (Hugo) LINC01611
HGNC Alias symbRP1-90L14.1
LocusID (NCBI) 105377880
Atlas_Id 77792
Location 6q14.3  [Link to chromosome band 6q14]
Location_base_pair Starts at 84421031 and ends at 84474929 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01611   51791
Entrez_Gene (NCBI)LINC01611    long intergenic non-protein coding RNA 1611
GeneCards (Weizmann)LINC01611
Ensembl hg19 (Hinxton)ENSG00000231776 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231776 [Gene_View]  ENSG00000231776 [Sequence]  chr6:84421031-84474929 [Contig_View]  LINC01611 [Vega]
ICGC DataPortalENSG00000231776
TCGA cBioPortalLINC01611
AceView (NCBI)LINC01611
Genatlas (Paris)LINC01611
SOURCE (Princeton)LINC01611
Genetics Home Reference (NIH)LINC01611
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01611  -     chr6:84421031-84474929 -  6q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01611  -     6q14.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01611 - 6q14.3 [CytoView hg19]  LINC01611 - 6q14.3 [CytoView hg38]
Genome Data Viewer NCBILINC01611 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BG194183 BG207527 BG214914
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01611
Gene ExpressionLINC01611 [ NCBI-GEO ]   LINC01611 [ EBI - ARRAY_EXPRESS ]   LINC01611 [ SEEK ]   LINC01611 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01611 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01611 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105377880
GTEX Portal (Tissue expression)LINC01611
Human Protein AtlasENSG00000231776-LINC01611 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01611
Human Protein Atlas [tissue]ENSG00000231776-LINC01611 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:58:16 CEST 2021

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