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LINC01612 (long intergenic non-protein coding RNA 1612)

Identity

Alias_symbol (synonym)RP11-789C1.1
TCONS_00008319
Other alias-
HGNC (Hugo) LINC01612
LocusID (NCBI) 101928223
Atlas_Id 77787
Location 4q33  [Link to chromosome band 4q33]
Location_base_pair Starts at 170226591 and ends at 170283722 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01612   51837
Cards
Entrez_Gene (NCBI)LINC01612  101928223  long intergenic non-protein coding RNA 1612
Aliases
GeneCards (Weizmann)LINC01612
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:170226591-170283722 [Contig_View]  LINC01612 [Vega]
TCGA cBioPortalLINC01612
AceView (NCBI)LINC01612
Genatlas (Paris)LINC01612
WikiGenes101928223
SOURCE (Princeton)LINC01612
Genetics Home Reference (NIH)LINC01612
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01612  -     chr4:170226591-170283722 +  4q33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01612  -     4q33   [Description]    (hg19-Feb_2009)
EnsemblLINC01612 - 4q33 [CytoView hg19]  LINC01612 - 4q33 [CytoView hg38]
Mapping of homologs : NCBILINC01612 [Mapview hg19]  LINC01612 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CB163075
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01612
Cluster EST : UnigeneHs.254617 [ NCBI ]
CGAP (NCI)Hs.254617
Gene ExpressionLINC01612 [ NCBI-GEO ]   LINC01612 [ EBI - ARRAY_EXPRESS ]   LINC01612 [ SEEK ]   LINC01612 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01612 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928223
GTEX Portal (Tissue expression)LINC01612
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01612
DMDM Disease mutations101928223
Blocks (Seattle)LINC01612
Protein Interaction databases
BioGRIDLINC01612
STRING (EMBL)LINC01612
ZODIACLINC01612
Ontologies - Pathways
Huge Navigator LINC01612 [HugePedia]
snp3D : Map Gene to Disease101928223
BioCentury BCIQLINC01612
ClinGenLINC01612
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928223
Clinical trialLINC01612
Miscellaneous
canSAR (ICR)LINC01612 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01612
EVEXLINC01612
GoPubMedLINC01612
iHOPLINC01612
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:57 CEST 2017

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