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LINC01617 (long intergenic non-protein coding RNA 1617)

Identity

Alias_namesC8orf23
NCRNA00249
chromosome 8 open reading frame 23
non-protein coding RNA 249
Alias_symbol (synonym)XLOC_006844
Other alias
HGNC (Hugo) LINC01617
LocusID (NCBI) 101926947
Atlas_Id 79648
Location 8q21.11  [Link to chromosome band 8q21]
Location_base_pair Starts at 73878982 and ends at 73883074 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01617   30442
Cards
Entrez_Gene (NCBI)LINC01617  101926947  long intergenic non-protein coding RNA 1617
AliasesC8orf23; NCRNA00249; XLOC_006844
GeneCards (Weizmann)LINC01617
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:73878982-73883074 [Contig_View]  LINC01617 [Vega]
TCGA cBioPortalLINC01617
AceView (NCBI)LINC01617
Genatlas (Paris)LINC01617
WikiGenes101926947
SOURCE (Princeton)LINC01617
Genetics Home Reference (NIH)LINC01617
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01617  -     chr8:73878982-73883074 +  8q21.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01617  -     8q21.11   [Description]    (hg19-Feb_2009)
EnsemblLINC01617 - 8q21.11 [CytoView hg19]  LINC01617 - 8q21.11 [CytoView hg38]
Mapping of homologs : NCBILINC01617 [Mapview hg19]  LINC01617 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA861243 DB514724
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01617
Cluster EST : UnigeneHs.642517 [ NCBI ]
CGAP (NCI)Hs.642517
Gene ExpressionLINC01617 [ NCBI-GEO ]   LINC01617 [ EBI - ARRAY_EXPRESS ]   LINC01617 [ SEEK ]   LINC01617 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01617 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101926947
GTEX Portal (Tissue expression)LINC01617
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01617
DMDM Disease mutations101926947
Blocks (Seattle)LINC01617
Protein Interaction databases
BioGRIDLINC01617
STRING (EMBL)LINC01617
ZODIACLINC01617
Ontologies - Pathways
Huge Navigator LINC01617 [HugePedia]
snp3D : Map Gene to Disease101926947
BioCentury BCIQLINC01617
ClinGenLINC01617
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101926947
Clinical trialLINC01617
Miscellaneous
canSAR (ICR)LINC01617 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01617
EVEXLINC01617
GoPubMedLINC01617
iHOPLINC01617
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:57 CEST 2017

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